Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0789 ATGGCGGGGGTTAGGCAGAGAGCAGTGACGACTCTCCCGAACATCATTCGAAGTCTCCGAAAGGAGCCATTGAAGCCTCAAAACCATTCTCTGCCTTCTCTTCGACGCGCTTTTTCTCTCTACGATCAAATCAACCTCATTGACCAAGTTCCCGATGACACCCTCCGATTCCAAGGGTATACTGATACAGGGTTTACTGTGAATGGTGTTGAATATGAAGGGAGCTTGCTTTGTGTTGGAAATTTGCTCTTATCTTGGAAAGCAAACAAGTTCTCAGATATCAATGCTAATAGCTTATCGCTCTTCCAAATTATTCGGCCTATTCCAGAGATTTTGATTATTGGCTGTGGAAGATACATTCAACCAGTGCATCCTGAACTTCGTCAGTTTGTTCGCTCTACTGGCATGAAGTTGGAAGCTGTTGACTCGAGGAATGCTGCTTCAACCTACAATATACTGAATGAGGAAGGTCGTATTGTGGCTGCAGCGCTTCTTCCATATGGAGTTTCTTCATGA 516 0.4457 MAGVRQRAVTTLPNIIRSLRKEPLKPQNHSLPSLRRAFSLYDQINLIDQVPDDTLRFQGYTDTGFTVNGVEYEGSLLCVGNLLLSWKANKFSDINANSLSLFQIIRPIPEILIIGCGRYIQPVHPELRQFVRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0789 171 Gene3D - 41 167 IPR036748 -
Amo19g0789 171 PANTHER NUCLEAR PROTEIN E3-3 4 171 IPR007523 -
Amo19g0789 171 SUPERFAMILY MTH938-like 44 167 IPR036748 -
Amo19g0789 171 PANTHER BNAC04G03830D PROTEIN 4 171 - -
Amo19g0789 171 Pfam Protein of unknown function (DUF498/DUF598) 58 165 IPR007523 -
Amo19g0789 171 CDD Mth938_2P1-like 55 168 IPR034095 GO:0032981
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0789 Amo-Chr19 12397760 12401074 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0789 K09008 - gmx:100816956 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0789 19 12397760 12401074 Amo02g0094 02 1077232 1080326 hybridization