Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0780 ATGGATCCTCAGGCCTTCATTAGGTTATCAATAGGCTCTCTTGGGCTACGATGTGCCGGAATTGAGGGAAGCACCGGAAGATCTAGAACTCAAAAGCCACCTTCTCCTTTTGTTTGTGAGATAMGGCTCCGGGGTTTTCCTGTTCAAACATCATCAGTCCCCTTGATATCCTCTACCGAAGCTATACCTGACGTWGAGAATGTTGCTACTAGCTTTTACCTTGAGGAATCTGATCTAAAAGCATTGTTGGCTCCCGGTTGTTTCTATAATACTCATGCTGGTTTGGAGATTGTTGTTTTCTCAGGTAGGAAGGGCTCCCATTGTGGAGTTGGCATCAAAAGGCAGCAAATTGGGATTTTTAAAATACAGGTAGGCCCTGAGTGGCGCGAAGGAAAGCCACTGACTCTTTTTAGTGGGTGGATAGGTATTGGGAAGAGAAGACCGGAGAACGGACGGCCAGTTGCCGAGCTACACTTAAGAGTGAAGCTAGATCCCGACCCTCGATACGTATTCCAGTTTGAAGATGTTACCACATTGAGTCCTCAGATAGTTCAACTGCAAGGGTCCATCAAGCAGCCAATCTTCAGTGTCAAGTTAACTAAGGACAGAGTTTCCCAGATTGATCCATTGAGCAATTATTGGTGTGGTTCTACAATTTCCGACTTGGAGATCGAGAGGCGAGAGAGAAAAGGGTGGAAGGTGAAGATACATGATCTATCCGGCTCAGCTGTAGCTGCAGCCTTCATAACAACTCCCTTTGTTCCATCTTCAGGTTGTGATTGGGTTGCAAGGTCCAACCCAGGAGCTTGGTTAATTCTTCGTCCGGACGCTTGTAGACCAGAGAGCTGGCAGCCGTGGGGAAAGCTTGAAGCTTGGCGCGAACGCGGCCTCCGAGACTCTGTCTGCTTTAGATTCCATGTCCTATCTGAGGCTCGGGAAGGCGGTGAACTTCTCATGTCAGAAATATTTTTAAGTGCTGAAAAGGGTGGCGAGTTTTTCATAGACACTGAAAGACACATGCGGACTGCAAACACCTCAGCAAGTCCAGTACCTAGTCCACAGAGCAGTGGGGACTTTGGTGCGCTGACTCCGGTAGGCGGAGGCTTTGTCATGAGCTGTAGAGTTCAAGGGGAAGGGAAACGAAGTAAACCGTTAGTCCAGCTGGCATTGCGACACGTTACATGCGTCGAGGATGCTGCCATCTTCATGGCACTTGCGGCAGCTGTTGACCTCAGCATTGAGGCATGCCGGCCGTTTCGTAGGAAGATTAGAAGAGGTTTCCGGCATTCTTTCTAA 1296 0.4861 MDPQAFIRLSIGSLGLRCAGIEGSTGRSRTQKPPSPFVCEIRLRGFPVQTSSVPLISSTEAIPDVENVATSFYLEESDLKALLAPGCFYNTHAGLEIVVFSGRKGSHCGVGIKRQQIGIFKIQVGPEWREGKPLTLFSGWIGIGKRRPENGRPVAELHLRVKLDPDPRYVFQFEDVTTLSPQIVQLQGSIKQPIFSVKLTKDRVSQIDPLSNYWCGSTISDLEIERRERKGWKVKIHDLSGSAVAAAFITTPFVPSSGCDWVARSNPGAWLILRPDACRPESWQPWGKLEAWRERGLRDSVCFRFHVLSEAREGGELLMSEIFLSAEKGGEFFIDTERHMRTANTSASPVPSPQSSGDFGALTPVGGGFVMSCRVQGEGKRSKPLVQLALRHVTCVEDAAIFMALAAAVDLSIEACRPFRRKIRRGFRHSF* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0780 431 PANTHER OS08G0163500 PROTEIN 1 429 IPR010410 -
Amo19g0780 431 Pfam Protein of unknown function (DUF1005) 1 427 IPR010410 -
Amo19g0780 431 PANTHER - 1 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0780 Amo-Chr19 12284932 12289343 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0780 - - lang:109362738 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0780 19 12284932 12289343 Amo19g0780 19 12284932 12289343 ECH
Amo19g0780 19 12284932 12289343 Amo02g0083 02 1000655 1004452 hybridization