Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0761 ATGGCGGAAGTCAGGAACAAGCAAGTGGTTCTCAAGGATTATGTGAGTGGTTTCCCCAAGGAATCGGACATGCACATTATTGAAGGCACTGTCACCTTGAAGCTTCCAGAAGCTTCCAGTGAGGTCCTTCTCATCAAGAACCTGTATTTGTCATGTGATCCTTACATGCGAATCCTCATGACCGAGGGTGCTTCTTCCTATACCCCTGGCTCTCCATTGACAGGATATGGTGTAGGTAGAGTCCTAGAATCTGGGCACCTGGATTATAAGAAAGGCGATTTACACACTGATGTTCCGCTTTCTTATTATACTGGAATTCTTGGTATGCCTGGAATGACAGCCTATGTTGGTTTTTTTGAATTATGCTCTCCCAAGAAAGGAGAGAAAGTTTTTGTTTCAGCCGCTTCTGGTGCAGTTGGTCAACTTGTTGGGCAGTTTGCTAAATTGGCCGGTTGTTATGTCGTTGGAAGTGCCGGAAGCAAAGAGAAGGTGGATCTATTGAAGAATAAATTAGGATTCGATGAAGCTTTTAACTACAAAGAAGAGTCGGATCTCAATGCTGCGCTGAAAAGATGCTTTCCCGAAGGCATCGACATTTACTTCGAGAATGTCGGTGGAAAGACACTTGATGCCGTACTACTGAATATGAGACTTCATGGCCGCATATCTGTCTGTGGAATGATCTCTCAATATAATCTTACTCAACCAGAAGGTGTAACAAATTTGGCGAATATGATATTTAAGCGCATTCGAATGCAAGGTTTCATGGTTAGTGATTCCTATAACCTTTATCCCAAATTCTTGGAGTTTCTTCTGCCACATATCAGAGAAGGGAAAGTTGTGTATGTGGAAGACATAGCTGAGGGTCTTGAGAATGGACCTGCTGCACTGGTTGGCCTTTATAGTGGTCTCAATTTTGGAAAACAAGTGCTTCTTGTTTCTCAGATTATGGCACAAGTGAGGAACAAGCAAGTGCTTCTGAAGAACTATGTCACTGGTTTCCCAAAGGAAAGTGACATGGAGATTGTGGAAGGTAGCATAACATTGAAGGTTCCAGAAGGTTCTAGTGATGTTGTGTTGCTCAAGAATCTCTACTTATCATGTGATCCGTACATGCGGATCCTCATGTACAAGGATACTCCTTTGTCTTTGGGATTTCAATATTCTCCTGGCTCACCATTGACGGCATTCGGTGTGAGTAAAGTGGTTGAATCTGGAGATCCAAAGTATAAGAAAGATGATTTAGTGTGGGGGGTTACTAAATGGGAGGAATACAGTTTGGTCCCTTCCGCTAAAATACTATTCAAGATTGACCACACTGATGTTCCACTTTCTTACTATACTGGAATTTTGGGTATGCCGGGAATGACAGCTTATGGTGGTTTCTTTGAATTAGGGTGTCCTAAGAAAGGAGAGAAAGTGTTTGTTTCAGCTGCCTCTGGTGCAGTTGGTCAACTTGTTGGCCAATTTGCTAAGTTGACTGGATGCTATGTTGTTGGAAGTGCTGGAAGTCAAGAAAAGGTGGATATATTGAAGAATAAATTAGGATTTGATGAAGCCTTTAACTACAAAGAAGAATCAAATCTCGATGCTGCTTTAAAAAGATACTTTCCGGAAGGCATTGACATTTACTTTGAAAACGTGGGCGGCAAGACACTTGATGCTGTGCTGTTGAACATGAGATCCCATGGTCGCATACCGGTATGTGGAATGATTTCACAATATAATCTCACTCAACCAGAAGGTGTAACGAATTTGGCAAATCTCATATACAAGGAGATTAAGATGCAAGGTTTTATTGTATCTCAATTCTATCCCCTTTATCCTAAATTCTTGGAGTTTATTCTGCCTCATATTAGAGAAGGGAAGATTGCATATGTGGAAGACATAGTCGAAGGTCTTGAGGGTGGCCCTGCAGCCTTAGTTAGTCTTTTCAGTGGTCAAAATCTCGGTAAAAAAATTGTGGCTATTGCCCCTGAATAA 1983 0.4175 MAEVRNKQVVLKDYVSGFPKESDMHIIEGTVTLKLPEASSEVLLIKNLYLSCDPYMRILMTEGASSYTPGSPLTGYGVGRVLESGHLDYKKGDLHTDVPLSYYTGILGMPGMTAYVGFFELCSPKKGEKVFVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKLGFDEAFNYKEESDLNAALKRCFPEGIDIYFENVGGKTLDAVLLNMRLHGRISVCGMISQYNLTQPEGVTNLANMIFKRIRMQGFMVSDSYNLYPKFLEFLLPHIREGKVVYVEDIAEGLENGPAALVGLYSGLNFGKQVLLVSQIMAQVRNKQVLLKNYVTGFPKESDMEIVEGSITLKVPEGSSDVVLLKNLYLSCDPYMRILMYKDTPLSLGFQYSPGSPLTAFGVSKVVESGDPKYKKDDLVWGVTKWEEYSLVPSAKILFKIDHTDVPLSYYTGILGMPGMTAYGGFFELGCPKKGEKVFVSAASGAVGQLVGQFAKLTGCYVVGSAGSQEKVDILKNKLGFDEAFNYKEESNLDAALKRYFPEGIDIYFENVGGKTLDAVLLNMRSHGRIPVCGMISQYNLTQPEGVTNLANLIYKEIKMQGFIVSQFYPLYPKFLEFILPHIREGKIAYVEDIVEGLEGGPAALVSLFSGQNLGKKIVAIAPE* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0761 660 PANTHER PROSTAGLANDIN REDUCTASE 317 658 IPR045010 GO:0016628
Amo19g0761 660 CDD double_bond_reductase_like 4 313 - -
Amo19g0761 660 PANTHER PROSTAGLANDIN REDUCTASE 95 315 IPR045010 GO:0016628
Amo19g0761 660 PANTHER PROSTAGLANDIN REDUCTASE 1 94 IPR045010 GO:0016628
Amo19g0761 660 CDD double_bond_reductase_like 320 657 - -
Amo19g0761 660 Gene3D - 450 626 - -
Amo19g0761 660 Gene3D - 106 282 - -
Amo19g0761 660 Gene3D - 1 96 - -
Amo19g0761 660 PANTHER QUINONE OXIDOREDUCTASE-LIKE PROTEIN 95 315 - -
Amo19g0761 660 Pfam N-terminal domain of oxidoreductase 7 94 IPR041694 -
Amo19g0761 660 Pfam N-terminal domain of oxidoreductase 323 432 IPR041694 -
Amo19g0761 660 PANTHER QUINONE OXIDOREDUCTASE-LIKE PROTEIN 1 94 - -
Amo19g0761 660 PANTHER QUINONE OXIDOREDUCTASE-LIKE PROTEIN 317 658 - -
Amo19g0761 660 SMART PKS_ER_names_mod 29 311 IPR020843 GO:0016491
Amo19g0761 660 SUPERFAMILY GroES-like 4 143 IPR011032 -
Amo19g0761 660 Pfam Zinc-binding dehydrogenase 138 271 IPR013149 -
Amo19g0761 660 Pfam Zinc-binding dehydrogenase 482 614 IPR013149 -
Amo19g0761 660 SUPERFAMILY GroES-like 319 487 IPR011032 -
Amo19g0761 660 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 449 619 IPR036291 -
Amo19g0761 660 Gene3D - 325 655 - -
Amo19g0761 660 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 105 276 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0761 Amo-Chr19 11982296 11991241 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0761 K19825 - gmx:100811802 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0761 19 11982296 11991241 Amo02g0074 02 867471 878969 hybridization