Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0757 ATGGGACAAATCCTCGACAAGCTTCAGGGTAAGGAGTGGAGGCGAAAGCAAATAAGGAAGATTACAGATCGAGTTTTTGATGGCGTGAAGAATGAGACGGGAAGGGCTAATTTGAAATTTGAAGATCTGTATATTGCTGTTTTGATTGTGTACAATGATATCAACAAGCATTTGCCTGGTCCACATTTTGATCCTCCACCAAAAGACAAAGTCAGAGAGATGATGCAGAATTGTGATATCAACCTTGATGGGGAAATCGACCGGGAAGAGTTTTACAATTTCATCAAGCAGTTGACTGCTGATACTTTCATCATTGTTAGTCAAAAGCTTATTATCACTTTGGCTGTAGCACCAGCTGTTGCATTGGCAACAAAGAGAAGCACTGAAAAGGTCCCTGGTGTTGGGAATGTGGTGCAGAAGATACCAAATTCGGTTTATGCTTCACTTGTGACCCTTGCAGTTGTGTGGTTCCAAAAACAGACCTTCGGAGATGATCCAAAGTACTAG 507 0.4181 MGQILDKLQGKEWRRKQIRKITDRVFDGVKNETGRANLKFEDLYIAVLIVYNDINKHLPGPHFDPPPKDKVREMMQNCDINLDGEIDREEFYNFIKQLTADTFIIVSQKLIITLAVAPAVALATKRSTEKVPGVGNVVQKIPNSVYASLVTLAVVWFQKQTFGDDPKY* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0757 168 SMART efh_1 70 98 IPR002048 GO:0005509
Amo19g0757 168 Gene3D - 16 99 - -
Amo19g0757 168 PANTHER S100 CALCIUM-BINDING PROTEIN 4 161 - -
Amo19g0757 168 SUPERFAMILY EF-hand 62 95 IPR011992 -
Amo19g0757 168 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Amo19g0757 168 PANTHER CALCIUM-BINDING EF HAND PROTEIN 4 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0757 Amo-Chr19 11934731 11938716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0757 1 156 EF-hand Containing Proteins AT1G64850 71.154 8.69e-83 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0757 - - adu:107472679 329.331