Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0752 ATGTCGCAACAACAACAGCAGAACAGCAACATACCAGTGAGCGAGGTTTTCTGGACTCTCGCTGATAAAGCCGACAAGAAGTTCTCCAACATCAGAGACTTGCCTTATTACCAGCGCTCTAGGCATGATACATACTTTTATAAGGTGTTCAAGGTGTACACACAATTGTGGAAGTTTCAACAGGAGAACCGGCAGAAGCTGGTAGAAGCAGGGCTAAAAAGATGGGAGATTGGTGACATTGCATCTCGCATTGGACAGCTATATTTTGGGCAGTATATGCGCACAAGTGAGGCGAATTATCTATCAGAGTCATACATATTCTATGAAGCCATATTGACGAGGGAGTATTTTAAGGAGGGGCTGTTTCAAGATGTGAATATTGCAAACAAACAATTRAGGTTTCTTGCACGGTTCCTGATGGTGTGTTTGGTCTTAAACCGAAGGGAAATGGTGCAGCAATTGGTTAATCAGCTTAAAGTATTAGTAGATGAATGCAAGAGGACATTCCAGGAAAGTGACTTTAAAGAATGGAAGCTGGTGCTTCAAGAAATAGTCAAATTTTTAAAAGCTGACACAGCTTTTATCAATATCAGACCCTTGAGATACAGTCTAGTTTTGGACCCTCATCCAGATACTTTACCACATGTTGCTGCAGCTATCACAAAACGAAGTTTAAAATTAAGAGATGCTGTCTTAAGTAGTTTCCATCCAAATGAGGTTAAGTTTTCAGATATTACTCTCGACACTTTTCGGATGCTTCAATGCCTGGAGTGGGAACCTAGTGGCTCATTTTACCAGTCTACTGGTTCAAAACTTGGTCAGAATGGAGCCACTGGGGCTAGTCGTATTAGTTACTCCCAAGAAATTGCTGATCCTACCTTACCTGCAAATCCACGGAAAGCTGTGTTATACCGTCCATCATTAACCCATTTTGTAGCTGTTCTTGCCACAATTTGTGAGGAGCTTCCTTCTGATGGTATTCTCCTTGTATACTTGTCGGCTTCAGGATCTTGCACTGCTGCAAAGAATGAATCTGGTTGTATACCTCCCCGTGGAGATGGAGGACCAAACTGTGTATACCCATCTGACTTTCTACCATTTACAAGAAGACCACTTCTTCTGGTCATCGATAATGATAACAGCAAAGCATTTAAGGTTATATCCGGAGCCGAAAAGGGAGAATCGATTGCTATGCTCCTTTCTCCAAGCTGTTCACCTYCAATTGCATCTGATTCTTCCTCTCATATTTCAAATGGTAGTATATTCACCATGTTTCTTACYGCTCCCCTGCAAGCTTTCTGTCTGCTGCTAGGATTTTCAGGCACTGATATTGATTTGGACAAATATAACAATGCTGAAATGCTGCTCTCATCTTCATTAAACAACTGGGGAGCTGTGTTGGCGACCACGGACACACTCAATCCTGTATGGGGACAGGTTTTAGGTGATCCCTTTATAAGGAGAATTCTTTTAAGATTCATGTTTTGTGAAGCAGTATTGACCTTGTACACTCCAGCTCAAGACAAAAGTGAGTTCCTTCCGACATGTGTCCCTTCTCTTCCAACGCCTGTCCTGCCACCAAATTATTCCTATCAGAATGTAATTCTGCAACTCGCCGGAATTTTCGGTGCAACTAAGTATTTCGTCTTCTCAGAGGATGATCTTGCTGACAAAACACAAACAAACCTGGAGTTGTAG 1698 0.4199 MSQQQQQNSNIPVSEVFWTLADKADKKFSNIRDLPYYQRSRHDTYFYKVFKVYTQLWKFQQENRQKLVEAGLKRWEIGDIASRIGQLYFGQYMRTSEANYLSESYIFYEAILTREYFKEGLFQDVNIANKQLRFLARFLMVCLVLNRREMVQQLVNQLKVLVDECKRTFQESDFKEWKLVLQEIVKFLKADTAFINIRPLRYSLVLDPHPDTLPHVAAAITKRSLKLRDAVLSSFHPNEVKFSDITLDTFRMLQCLEWEPSGSFYQSTGSKLGQNGATGASRISYSQEIADPTLPANPRKAVLYRPSLTHFVAVLATICEELPSDGILLVYLSASGSCTAAKNESGCIPPRGDGGPNCVYPSDFLPFTRRPLLLVIDNDNSKAFKVISGAEKGESIAMLLSPSCSPXIASDSSSHISNGSIFTMFLTAPLQAFCLLLGFSGTDIDLDKYNNAEMLLSSSLNNWGAVLATTDTLNPVWGQVLGDPFIRRILLRFMFCEAVLTLYTPAQDKSEFLPTCVPSLPTPVLPPNYSYQNVILQLAGIFGATKYFVFSEDDLADKTQTNLEL* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0752 565 PANTHER PROTEIN SCAI 347 560 - -
Amo19g0752 565 PANTHER PROTEIN SCAI 3 342 - -
Amo19g0752 565 Pfam Protein SCAI 353 504 IPR022709 GO:0003714|GO:0006351
Amo19g0752 565 Pfam Protein SCAI 20 343 IPR022709 GO:0003714|GO:0006351
Amo19g0752 565 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 3 342 - -
Amo19g0752 565 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 347 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0752 Amo-Chr19 11858155 11865263 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0752 - - gmx:100810202 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0752 19 11858155 11865263 Amo19g0752 19 11858155 11865263 ECH