Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0733 ATGGAAGACACGGATTCAGTTGCTACACTGATAGATTCAACAAGTTCTAAGATAAAACAGCTCCAAAAGGCATTTGCTGAACTTGAAAGCTATCGAGCTGTTACACTTAACTTGAAATGGAAAGAGCTTGAGGAACATTTCCATGGACTTGAGAAATCATTGAAGAGACGCTTTCATGAATTGGAGGACCAAGAGAAAGAGTTTGAAAACAAAGTGGTGAAGTCTCGTGAAATATTGGAGAAGCGGGAAGTGGCTGTTTGTGCCAAGGAGCAAGCTTCTTTGCAGAAACTTCAAGATAAAAGAGATGCTGCTGTGTTTGCCATTTTTAATGCCCGAGAAAAGCACAGGAAGCTATGTAAAGAAATGGATGCTAGAGGTCTTCACAAATTCATATCTGATAACCGTAAGAATCTTGCTGCTATAAGGGATGAAATACCACATGCATTAGGATTTGCTCCTAATGCTGCCTGTTTAGTTTTAGATTCTTTGGAAGGATTTTACTGTGCAGAAGCGTCAAATCAGGATGTAAAGAAGGATGCTAACTTATTGGGCCTACGCCGAACCTGTATCATGCTGATGGAATGTTTGTACGTTTTCTTGAACAACTCAGATGGTGTCTCTAATGAACTTTCAGAAGATATCAAGGACAGGGCAAAAGCAGTTGCTGAAGAGTGGAAACCCAGATTGGATGCTCTAGATGTGGATGCTGGCAATGGGAATTCCTTAGAGGCTCATGCATTTTTGCAACTTCTAGCATGTTTTGATATTGCCTCTGATTTTAACGAGGAGGAGTTTTCCAGGTTCATTCCAATGGTTTCTCGGCGTCGCCAAACTGCTGATTTGTGTCGTTGCCTTGGGTTGTCTGAGAAAATGCCTGGTGTGATTGAAGTATTGGTGAACAGCGGGCGGCAAATTGATGCAGTTAATTTGGCTTTTGCATTCAATCTTACAGAACAGTTTTCTCCCACGGATTTATTGAAGTCTTACTTGAAGGATGCCAAAAAAGCTGCATCTCCTTCCAGATGTGTTAACTCATCTCCCACTACACAGGTTGAGGTTAATGAGCGAGAACTGGTTGCCCTCAAGTCCATAATCAAGTGCATCGAAGAACATAAACTCGAGGAGCAGTATCCTCTAGATCCTCTCATGAAACGGGTGGTCCAACTCGAGAAAGCCAAAGCAGACAAGAAGAGGGAAACTGAAGCAACAAAGCCTCAACCGAAGAGACCCCGTGCTAATGGTGTGGGATATGGTCCGCGTGTTTCTAACTTCCCTTCTGACAAAGCCTCCTATCCTAGAGCCGCTGACAGGTACCCACAGTACGTATTCGACCGGCCTTATGTGTACCCTGGACCAACTGACAATCATTGCCCCCCTCTCATGGGGTCCACGACCTATAACTTCACCCTGAGTCATGGCAACTACTTTGGAAATGGCTATCAATACCAGCCAACATATCTCCATTAG 1467 0.4363 MEDTDSVATLIDSTSSKIKQLQKAFAELESYRAVTLNLKWKELEEHFHGLEKSLKRRFHELEDQEKEFENKVVKSREILEKREVAVCAKEQASLQKLQDKRDAAVFAIFNAREKHRKLCKEMDARGLHKFISDNRKNLAAIRDEIPHALGFAPNAACLVLDSLEGFYCAEASNQDVKKDANLLGLRRTCIMLMECLYVFLNNSDGVSNELSEDIKDRAKAVAEEWKPRLDALDVDAGNGNSLEAHAFLQLLACFDIASDFNEEEFSRFIPMVSRRRQTADLCRCLGLSEKMPGVIEVLVNSGRQIDAVNLAFAFNLTEQFSPTDLLKSYLKDAKKAASPSRCVNSSPTTQVEVNERELVALKSIIKCIEEHKLEEQYPLDPLMKRVVQLEKAKADKKRETEATKPQPKRPRANGVGYGPRVSNFPSDKASYPRAADRYPQYVFDRPYVYPGPTDNHCPPLMGSTTYNFTLSHGNYFGNGYQYQPTYLH* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0733 488 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 117 488 - -
Amo19g0733 488 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 3 119 - -
Amo19g0733 488 PANTHER FRIGIDA-LIKE PROTEIN 117 488 - -
Amo19g0733 488 Coils Coil 51 71 - -
Amo19g0733 488 MobiDBLite consensus disorder prediction 392 430 - -
Amo19g0733 488 Pfam Frigida-like protein 111 400 IPR012474 -
Amo19g0733 488 MobiDBLite consensus disorder prediction 392 406 - -
Amo19g0733 488 PANTHER FRIGIDA-LIKE PROTEIN 3 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0733 Amo-Chr19 11415065 11419498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0733 - - adu:107472711 936.406