Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0710 ATGAATAATAATGAAATGGAAGGCCTAAAAAGGGTTTCTAGCATGAGGAGGTGCTCCAATGTTGTTAAAACCAAAATTGTCAACAACTTGAATCCAATTTGCCATGCTGGTCAACAATTGACACTCAAGGGCAAGTTCTTCATTACTCTCACTCAGGATCAAAGAAAATCAATACCTGGAAAATTTATTTCTGTTCAGATTTACAGTGGCACAGAAGTAGATCCAATAACAGGGAAAGGGAAGCTAAGTGAGAAGGCAGTTCTCAAACATGATGGGACAAAAAAACATGACAATGGGGATGCAAAAACCATGATATATAAAATTAGAATAAATGTTTATTCACATTTTGGAACACCAAGAGCTTTTTTGATACAGAACCGATACAAGAAGAGATTCTTCCTTCAATCTGCATCAATTGAAACTTGTAACAATCATATCATTCACTTTGATTGCAATTCTTGGGTGTATCCAATCAAGAAGACCAAATCCGATAGACTCTTCTTCTCAAATGCTTGCTATATTCCAAGCGAAACGCCAAGGGCACTAATGGAATTAAGAAAGGAAGAGCTTGAAAGATTGAGGGGTGAGAGTGATGTAAATAGTGAAAGTGAAGAAAGGAAGGAATGGGGAAGAATATATGAATATGATTGCTATAATGACCTTAGTGACCCTGAGAAAGGTCCTGAATATCTTAGACCTATATTGGGTGCTTCTTGGTTATATCCATATCCTCGTAGACTAAGAACAGCTCGCAAGCCTAGTGCCTCAGGTCCAGCAAATGAGAGCCGGCCAAGGAATTTTGAGATATATGTTCCTTCAGATGAGAGATTTAGTCCAAATAAAATGAAGGAACTGAAATCAAATTCTATACATGCTCTTGCACATTTCTTGTCACCCAAGGCACTTCATCAACAATGTTCCAAAAGCTTTGAATCATTTGAAGATATTCTTGACTTGTTCTCTGCCTCTAGGAACCAAAGAATTGAAGGGTGGGTCAGAGATAACTTAAACAAAATGTTACCAATTCAGAACTTAGAGGAAATTATTCGTCTAATCAAGAATAAACCATTAGAACTTCCTATACCTGAAATATTATCTGAAAATGCATGGGTTTGGAAAGATGACATTGAGTTTGGAAGACAAATGCTGGCTGGAACCCACCCAATCAAAATCCAATGTTTGAAGACATTCCCAACTCAGAGTTCAATAAATCCATCATTCATAGAACAGAGGCTTGAAGGATGGACACTTCCTCAGGCACTGAAGCATGGAAGATTATTCATGCTTGATCACCATGAGTACCTGTATCCATTTCTGAACAGAATAAACTTAAATGGGGTATGTGCCTATGCATCAAGGACATTCCTATTCTTAAGGAGTGATGGCATGCTTAAGCCTATGGCTATAGAACTTAGCTTGCCAGGCTCATCTCTAAGCAAGGGAATCTGCAGAGTGTTTTTCCCAGCCAAACAGGGAATAGAAGCAGCTCTTTGGCAGCTTGCTAAGGCTCATGTTCAAGCTAACGACACAGTTTATCATCAACTTATTAGCCATTGGTTACACACCCATGCAGTTGTTGAACCATTTATCATTGCCACCAAAAGAAGGCTAAGTGTGATGCACCCAATTCATAGGTTATTGAATCCTCATTTCAAAGACACAATGCATATAAATGCCTTAGCAAGAATTATCCTTATAAATTCAGGAGGAGTTCTTGAGAGAACACTATCATCTGGTGAAATCTCCATGCAATTATCTTCTGAGCTCTATAAAGAGTGGAGATTTGATGAACAAGGACTTCCTGCTGATCTAATCAAAAGGGGAATGGCCATAAAAGATGAAAACAGCCAAAGTGGGGTTCAACTTCTCTTGCAAGATTATCCCTATGCAACAGATGGGCTTGAAATTTGGGTAGCCATAAAGAAATGGGTGAAGGATTTCTGTTCATTCTATTACAAAGATGATGAGTCAATTAGGTCAGATGTTGAACTTCAATCTTGGTGGTCAGAGATCCGAACCATTGGACATGGTGACAAGCACAATGAGACATGGTGGTACCAAATTGACACAACCTCAAGTCTCGTTGAGTCACTAACAATCCTAATTTGGGTAGCTTCTGCCCAGCATGCCGCTATAAACTTTGGACAATATGCATACAATGGCTACCCTCCAAATAGGCCTACATTGTGTAAGAAATTTGTCCCAATGGAAGGTACAATCCAGTTTGGTGAGTTTTTGAAGGACCCAGACAAATACTTCCTAAAGATGTTGCCAAATAGGTTTGAGATGAGCCTTGTTGTAGCATTGTTTGATGTGCTCTCAAGGCACACCTCTGATGAGGTCTACTTGGGGTGCCAGCTGTCACCTGGTTGGATAGACAGTGAATCTATTCAAAATAGGTTTGCAGAGTTTAAGGAAGAATTGAAAGAGATTCAGGCAAGGATCTTGGAAAGAAATAGAGATCCTAAGCTTAAGAACAGGCGTGGACCAGCAAAGATTGATTACACTCTGTTATATCCTGACACCTCTAGTTCTTGGTCTAGAACAGCACTCACTTGCAGAGGGATTCCTAATAGCATTTCAATTTAA 2589 0.3924 MNNNEMEGLKRVSSMRRCSNVVKTKIVNNLNPICHAGQQLTLKGKFFITLTQDQRKSIPGKFISVQIYSGTEVDPITGKGKLSEKAVLKHDGTKKHDNGDAKTMIYKIRINVYSHFGTPRAFLIQNRYKKRFFLQSASIETCNNHIIHFDCNSWVYPIKKTKSDRLFFSNACYIPSETPRALMELRKEELERLRGESDVNSESEERKEWGRIYEYDCYNDLSDPEKGPEYLRPILGASWLYPYPRRLRTARKPSASGPANESRPRNFEIYVPSDERFSPNKMKELKSNSIHALAHFLSPKALHQQCSKSFESFEDILDLFSASRNQRIEGWVRDNLNKMLPIQNLEEIIRLIKNKPLELPIPEILSENAWVWKDDIEFGRQMLAGTHPIKIQCLKTFPTQSSINPSFIEQRLEGWTLPQALKHGRLFMLDHHEYLYPFLNRINLNGVCAYASRTFLFLRSDGMLKPMAIELSLPGSSLSKGICRVFFPAKQGIEAALWQLAKAHVQANDTVYHQLISHWLHTHAVVEPFIIATKRRLSVMHPIHRLLNPHFKDTMHINALARIILINSGGVLERTLSSGEISMQLSSELYKEWRFDEQGLPADLIKRGMAIKDENSQSGVQLLLQDYPYATDGLEIWVAIKKWVKDFCSFYYKDDESIRSDVELQSWWSEIRTIGHGDKHNETWWYQIDTTSSLVESLTILIWVASAQHAAINFGQYAYNGYPPNRPTLCKKFVPMEGTIQFGEFLKDPDKYFLKMLPNRFEMSLVVALFDVLSRHTSDEVYLGCQLSPGWIDSESIQNRFAEFKEELKEIQARILERNRDPKLKNRRGPAKIDYTLLYPDTSSSWSRTALTCRGIPNSISI* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0710 862 Gene3D - 174 279 - -
Amo19g0710 862 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 51 173 IPR036392 GO:0005515
Amo19g0710 862 SMART LH2_4 42 170 IPR001024 GO:0005515
Amo19g0710 862 Pfam Lipoxygenase 182 840 IPR013819 GO:0016702|GO:0046872
Amo19g0710 862 Gene3D - 491 861 - -
Amo19g0710 862 ProSitePatterns Lipoxygenases iron-binding region signature 1. 513 527 IPR020833 GO:0016702|GO:0046872
Amo19g0710 862 Gene3D PLAT/LH2 domain 7 173 - -
Amo19g0710 862 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 172 862 IPR013819 GO:0016702|GO:0046872
Amo19g0710 862 Gene3D - 281 369 IPR027433 -
Amo19g0710 862 PANTHER LIPOXYGENASE 97 860 - -
Amo19g0710 862 ProSiteProfiles PLAT domain profile. 44 169 IPR001024 GO:0005515
Amo19g0710 862 PRINTS Plant lipoxygenase signature 450 474 IPR001246 GO:0016491
Amo19g0710 862 PRINTS Plant lipoxygenase signature 770 784 IPR001246 GO:0016491
Amo19g0710 862 PRINTS Plant lipoxygenase signature 139 157 IPR001246 GO:0016491
Amo19g0710 862 PRINTS Plant lipoxygenase signature 307 328 IPR001246 GO:0016491
Amo19g0710 862 PRINTS Plant lipoxygenase signature 242 261 IPR001246 GO:0016491
Amo19g0710 862 PRINTS Plant lipoxygenase signature 209 225 IPR001246 GO:0016491
Amo19g0710 862 Coils Coil 794 821 - -
Amo19g0710 862 Gene3D - 371 490 - -
Amo19g0710 862 PRINTS Lipoxygenase signature 513 530 IPR013819 GO:0016702|GO:0046872
Amo19g0710 862 PRINTS Lipoxygenase signature 533 553 IPR013819 GO:0016702|GO:0046872
Amo19g0710 862 PRINTS Lipoxygenase signature 495 512 IPR013819 GO:0016702|GO:0046872
Amo19g0710 862 ProSitePatterns Lipoxygenases iron-binding region signature 2. 540 550 IPR020834 GO:0016702|GO:0046872
Amo19g0710 862 PANTHER LIPOXYGENASE 97 860 IPR000907 GO:0016702|GO:0046872
Amo19g0710 862 SUPERFAMILY Lipoxigenase 174 862 IPR036226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0710 Amo-Chr19 11094071 11106601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0710 53 862 Acyl Lipid Metabolism Gene Families AT3G22400 45.096 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0710 K00454 - gmx:100793997 1286.94