Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0684 ATGGCTTCCACTGCTGTTGCCACCTCCTCCGTCCCTGCCGCCGTGAGGACGGAACCGCTGCCGCAGCCGTCTGATTCTTCTCCTTCCAGAACCTCCGCCGCCGCCGAGGTGTCGCTTTTATCGTCCTCACCCGCCGCCGAGGTCATTGATCGTAGCGATTCTTCCAATTCATCGCCGAACCTATTTGCTGACGCTGAAAATCAGACTATGGACGCGTTGAAGAGTGAAGAGTATCGGCAGCTGTTTCGTCTTCCACCAGATGAAGTCCTTATTGAAGATTTTAATTGTGCCCTCCAGGAAAATATACTTATTCAGGGTCATATGTACCTTTTTGTCAACTTTATATGTTTCTACTCGAACATATTTGGGTTTGAGACAAAGAGAATAATTGCATTCCCAGAAGTCACAAGTGTACGTAGGGCAAAGACAGCTGGGCTCTTTCCCAATGCCATTGAGATTCTTGCTGGCAACAGGAAGTACTTTTTCGCATCTTTCCTATCCCGTGATGAAGCTTTTAAGATTATTAATGATGGATGGTTACGGCAGGCTAATGGTACCAGAGCAGTTATTGAACAGGAGTCTATGTCCGAGTGCAGCGGCCAAGACAGTGAACTTATAGCTACTGAAAATGTCAAGAGTTCTGATATATTAGACAATGACTCTCCTTCTGCAGACCCAAGCAAGGTTACTACTAATATTATCAACGACATGGGACCTCCATCAAATATTATAGATAGCCCTGTAGTGATGAAAGTTACAGATAAACAATCCAGTACAAAACAGGTAGCTGAACCTGTATTGAATGAAGATTCTCCAGCTGCGAGTTCATGCTGGAAAGAGGAGGACATTGATGCTCCAACAATCCCAGAAGAATACACATGTGTTGCAGAAGCTGAGTTTCCGATAAAGGTTGAAGACTTCTTTAGGTACTTTTTCTCAGATGATGCTGTAAACTTTCATGAGTCTTTCCATAAAAGATGTGGTGATAAAGACTTCAAGTGTAGTTCGTGGCGTCCTCAAGAGAAATTTGGGTATGCTCGTGAACTATCTTTTCAACATCCAATAAAACTTTATCTTGGAGCAAAATTTGGTGGCTGCCATGAGCTTCAGAAATTTCGAGTGTATAAGAGCAGTTGCTCCATTGATTACTTGAAATATATGAAGAACTTATTTATTTATTTTTTTTTTACTTATTTTTTTTTTACTTCTTTCAGTCATCTGGTTATAGAGACATCACAAGAAGTCAGTGATGTACCTTATGCAGATTATTTTCGTGTTGAGGGACTGTGGGATATACAGAGACACAAGGATGACTCTTGCATTTTGAGAGTATATGTGACTGTAGCATTTTCTAAGAAAACTATTTGGAGAGGCAAAATATTACAATCAACCGTTGAAGAATGTCGAGAAGCTTATACTACTTGGATTAGCATGGCACATGACTTGTTGAAGCAGAAAAACCTAGAAAAGCAAGGTTTAACATTTGCAATTTCTATATATGTTCTTAAATTTTGA 1515 0.4073 MASTAVATSSVPAAVRTEPLPQPSDSSPSRTSAAAEVSLLSSSPAAEVIDRSDSSNSSPNLFADAENQTMDALKSEEYRQLFRLPPDEVLIEDFNCALQENILIQGHMYLFVNFICFYSNIFGFETKRIIAFPEVTSVRRAKTAGLFPNAIEILAGNRKYFFASFLSRDEAFKIINDGWLRQANGTRAVIEQESMSECSGQDSELIATENVKSSDILDNDSPSADPSKVTTNIINDMGPPSNIIDSPVVMKVTDKQSSTKQVAEPVLNEDSPAASSCWKEEDIDAPTIPEEYTCVAEAEFPIKVEDFFRYFFSDDAVNFHESFHKRCGDKDFKCSSWRPQEKFGYARELSFQHPIKLYLGAKFGGCHELQKFRVYKSSCSIDYLKYMKNLFIYFFFTYFFFTSFSHLVIETSQEVSDVPYADYFRVEGLWDIQRHKDDSCILRVYVTVAFSKKTIWRGKILQSTVEECREAYTTWISMAHDLLKQKNLEKQGLTFAISIYVLKF* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0684 504 CDD PH-GRAM_GRAMDC 86 179 - -
Amo19g0684 504 Gene3D - 74 182 IPR011993 -
Amo19g0684 504 ProSiteProfiles VASt domain profile. 291 487 IPR031968 -
Amo19g0684 504 SMART gram2001c 76 142 IPR004182 -
Amo19g0684 504 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 12 490 - -
Amo19g0684 504 Pfam VAD1 Analog of StAR-related lipid transfer domain 295 466 IPR031968 -
Amo19g0684 504 Pfam GRAM domain 78 179 IPR004182 -
Amo19g0684 504 MobiDBLite consensus disorder prediction 1 39 - -
Amo19g0684 504 MobiDBLite consensus disorder prediction 20 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0684 Amo-Chr19 10638228 10648714 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0684 - - adu:107464474 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0684 19 10638228 10648714 Amo19g0684 19 10638228 10648714 ECH