Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0679 ATGCAATGCAGCAACACAGAGGTTGGAGCTGGGACTATGAATCCTCTTACATATTTAAGGGTTCTCGGTCCAGAACCATGGAATGTTGCATATGTAGAGCCTAGCATCCGCCCCGATGATAGCCGATATGGAGAAAACCCAAATAGGCTCCAAAGACACACTCAGTTTCAGGTCATATTGAAGCCTGATCCTGGAAATTCACAGGACCTTTTTATCCGCAGCCTATCAGCTTTAGGTATTGATGTTACTGCTCATGATATACGATTTGTGGAGGACAATTGGGAGAGTCCGGTTCTTGGTGCTTGGGGTTTAGGCTGGGAAATCTGGATGGATGGGATGGAGATTACGCAATTCACCTACTTCCAGCAGGCAGGAAGTCTCCCGCTATCACCTGTTTCCGTAGAAATCACGTATGGCCTTGAGCGTATCATTATGTTACTACAGGGAGTTGATCATTTCAAGAAGATCAAATATTCCGATGGAATTACATATGGAGAGTTGTTCTTGGAGAATGAGAAAGAAATGAGTGCATATTACTTGGAGCATGCCAGTGTTGATCATGTTCAAAAACATTTTGATTTCTTTGAGGAGGAAGCTCGTAGATTACTTTCTTCAGGCTTAGCAATCCCTGCGTATGATCAGCTTCTAAAAACATCTCATGCTTTCAATATATTAGATTCCAGAGGCTTTGTTGGGGTGACAGAGCGTGCTCGATATTTTGGTCGAATGCGTAGTTTAGCTCGCCAGTGTGCACAACTTTGGTTGAAGACTAGGGAGAATCTTGGCTTCCCTCTTGGTTTCATCTCTGAACCTGATAATTTTGTATTGCCAAAAGAAGTTCTTGAGGCTGCTTGTGAGAAGGTGCATGATCAGTCAAGAGCATTTGTTCTTGAAATTGGAACAGAAGAGATGCCCCCTCAAGATGTTGTAGATGCAAGCAAGCAACTGAAAGATTTGATGCTGCAATTACTAGAGAAACAGAGGTTAAATCATGGCAACATGCAAGTTTTTGGCACCCCACGCAGATTAGTGGTTGCCATTGAAAATCTTTCCACAAAACAAGCAGAAGTGGAGGTTGAGGTTCGAGGTCCTCCAGTTTCAAAATCGTTTGATCATGAAGGAAACCCAACAAAGGCCATTGAAGGATTTTCCCGTAGATACTCTGTTCCACTGGACTTGGTATACCGAAAGGTTGATGGAAAAACAGAATATGTTTATGCTCGTGTGAAGGAGCTTTCAAGATATTCTTTAGAGGTTCTGTCTGAAGATTTGCCTGCTACTATTTCTAAAATATCATTTCCAAAGACGATGAAATGGAATTCTCAGGTGATATTTAGTAGGCCTATCCGTTGGATTTTGGCTATGCATGGAGATGTAGTAGTCCCGTTTATGTTTGCTGGGGTATTGAGTGGAAACTTATCTCGTGGTCTTCGCAATACTTCTTCAGCTATCCTCCAGGTTGAAAGTGCAGAATCTTATTCAGTTGCAATGAAACATGCGGGAATCAATGTTGCAGTTGAGGACCGCAAGAAAATGGTTGTTGAGCAATCTAATGCATTAGCAGAAAGTGTAAATGGCCAAATTGTTATTCCAACAGGCTTGCTTGATGAGGTTGTAAATCTTGTTGAGGCACCTATTCCAGTGCTTGGAAAGTTTAAAGAAACCTTCTTGGCCCTTCCAAAAGAACTTTTGACCATGGTTGCAAATGGAGCAATTGATGAGACTACTGTGAGGAAAGGAAATGAAGCTGTCCTCAGGGCTCGCTATGAAGATGCCAAGTTCTTTTATGAGATGGACACTCGTAAAAAATTCTCTGAATTCCGGAAGCAACTTAAAGATATTCTGTTTCATGAGAAGCTTGGAACCATGTTGGATAAGATGACTCGTATAGAAAACATGGTGATTATGCTAAGTTGCATCCTGAATATTAGTGAAGATAAACAACAAATCATCCGGGATGCTGCCTCGCTTGCTATGTCTGATCTTGCCACTGCTGTTGTCACTGAATTCACCTCACTTTCAGGAATAATGGGGCGTCACTATGCCATTAGAGATGGATATTCGGAGCAGATTGCAGATGCCTTGTTTGAGATCACGCTTCCTAGATTTTCTGGGGACATGCTACCTAAGAGTGATGCTGGCATAGTTTTGGCCATTGCTGATAGATTAGACAGCCTGGTAGGTTTGTTTTCTGCTGGATGTCAACCTAGTTCTACAAATGACCCATTTGGTCTGCGAAGAATCTCCTATGGTCTTGTACAATTGTTGGTGGAAAAGAACAAAAACCTGAACTTGAAAGAGGCTCTGCAACTTGCTGCAGATGCACAATCCATCAAAGTGGATCCGCATGTAATAGATGATGTACATCAGTTTGTTACTCGAAGATTAGAGCAGTTTCTGGTTGACAAGGGAGTGAGTGCAGAATTTGTTCGTTCTGTCCTTGCTGAGAGGGCAAAATTTCCCAGTCTAGCAGCAAAGTCAGCATATAAAATGGAAGAATTATCAAGAGATACACTTTTCCCTAAAGTGGTTGAAGCATACTCTCGACCAACAAGAATTGTCCGTGGGAAGGAAGGCGAACTTAATATGACGGTGGATGAGGCTGCTTTTGAGACAAATGAAGAGAGAGTTTTATGGAGCACATTTTTGTCAGTTAAAGAGAGCATTAATCCTGGTCTTGACATTGATGATTTTGTTGAGATTTCATCTCAGCTAATACAGCCGCTTGAAGATTTTTTCAACAATGTCTTTGTTATGGTGGATGATGATAAGATCAGAAAAAACAGGCTAGCTATGCTAAAAGAAATTTCTGAGCTTCCAAGAGGAATAGCAGACCTCACAGTGTTCAAGTCTTTTGAGTAG 2862 0.4172 MQCSNTEVGAGTMNPLTYLRVLGPEPWNVAYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGIDVTAHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLPLSPVSVEITYGLERIIMLLQGVDHFKKIKYSDGITYGELFLENEKEMSAYYLEHASVDHVQKHFDFFEEEARRLLSSGLAIPAYDQLLKTSHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWLKTRENLGFPLGFISEPDNFVLPKEVLEAACEKVHDQSRAFVLEIGTEEMPPQDVVDASKQLKDLMLQLLEKQRLNHGNMQVFGTPRRLVVAIENLSTKQAEVEVEVRGPPVSKSFDHEGNPTKAIEGFSRRYSVPLDLVYRKVDGKTEYVYARVKELSRYSLEVLSEDLPATISKISFPKTMKWNSQVIFSRPIRWILAMHGDVVVPFMFAGVLSGNLSRGLRNTSSAILQVESAESYSVAMKHAGINVAVEDRKKMVVEQSNALAESVNGQIVIPTGLLDEVVNLVEAPIPVLGKFKETFLALPKELLTMVANGAIDETTVRKGNEAVLRARYEDAKFFYEMDTRKKFSEFRKQLKDILFHEKLGTMLDKMTRIENMVIMLSCILNISEDKQQIIRDAASLAMSDLATAVVTEFTSLSGIMGRHYAIRDGYSEQIADALFEITLPRFSGDMLPKSDAGIVLAIADRLDSLVGLFSAGCQPSSTNDPFGLRRISYGLVQLLVEKNKNLNLKEALQLAADAQSIKVDPHVIDDVHQFVTRRLEQFLVDKGVSAEFVRSVLAERAKFPSLAAKSAYKMEELSRDTLFPKVVEAYSRPTRIVRGKEGELNMTVDEAAFETNEERVLWSTFLSVKESINPGLDIDDFVEISSQLIQPLEDFFNNVFVMVDDDKIRKNRLAMLKEISELPRGIADLTVFKSFE* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0679 953 SUPERFAMILY Class II aaRS and biotin synthetases 2 260 IPR045864 -
Amo19g0679 953 Gene3D Class II aaRS and biotin synthetases; domain 2 184 263 - -
Amo19g0679 953 PRINTS Glycyl-tRNA synthetase alpha subunit signature 135 150 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Amo19g0679 953 PRINTS Glycyl-tRNA synthetase alpha subunit signature 220 236 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Amo19g0679 953 PRINTS Glycyl-tRNA synthetase alpha subunit signature 34 49 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Amo19g0679 953 PRINTS Glycyl-tRNA synthetase alpha subunit signature 112 132 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Amo19g0679 953 PRINTS Glycyl-tRNA synthetase alpha subunit signature 55 75 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Amo19g0679 953 PRINTS Glycyl-tRNA synthetase alpha subunit signature 86 110 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Amo19g0679 953 Hamap Glycine--tRNA ligase beta subunit [glyS]. 292 949 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Amo19g0679 953 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 625 914 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Amo19g0679 953 SUPERFAMILY HD-domain/PDEase-like 598 730 - -
Amo19g0679 953 PANTHER GLYCYL-TRNA SYNTHETASE 291 950 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Amo19g0679 953 Hamap Glycine--tRNA ligase alpha subunit [glyQ]. 1 260 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Amo19g0679 953 Pfam Glycyl-tRNA synthetase beta subunit 566 815 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Amo19g0679 953 Pfam Glycyl-tRNA synthetase beta subunit 295 567 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Amo19g0679 953 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 1 255 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Amo19g0679 953 Gene3D Bira Bifunctional Protein; Domain 2 1 183 IPR045864 -
Amo19g0679 953 TIGRFAM glyQ: glycine--tRNA ligase, alpha subunit 1 265 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Amo19g0679 953 Pfam Glycyl-tRNA synthetase alpha subunit 2 259 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0679 K14164 - gmx:100787365 1655.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0679 19 10548310 10570853 Amo19g0679 19 10548310 10570853 ECH