Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0623 ATGCATCATAAGAAATCCGAAGTTCAGATCGGAAAAGAAAGCAGTGGCGTCTCTTCCGATTTCATTTTCAACCAACCAACTCACCAAACTCAAACCGCCACAACTTACAAGAGACCACTCTTGACCCAATCCCTCTCCAAATCCCCAACCCTCTACCAACTAGCAACGTCTTCGGCGGCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCATCCAAAAGTGATAACAATAACAGAATTCAGTTATTGCTTAACAGGATTCAGTTAGTCGCTAACAGAATTCAGTTTCAGTTACCTTCGATTCGCGGCCTGAGGTTCCACGTCACCATCGTTATCCTCTCGTTCTTTGTGTTCTATCTGATTATCGTTTTCTTTCCTGACAACTTCTTGCTCCTTCTTGAGTTCGTCTCCGCCGTCTCTGCCGCCGGGGCCTTGCTCTTTTCCCTTCAATTAGCCCTCCCACGCCTCCCATCCTCCATCCGCCGATTCAGGCCGCGGCCGCTGCTGCCGGTCTTCTGGGCCGTGGGGAGGAAGAAACAGAAACAGCAGGGCTCCTCCTACGGTGGATCCACGGGTTTTCGGGAGCAGGTGTTCTCGAACGGCGACGTTTACCAGGGGGAGATAAGGAAGGGGAAGTGTTGGGGGAGTGGGGTTTATTATTATAGTATGAGTGGGAGGTATGAAGGGGATTGGGTGGATGGGAAGTATGAGGGTTTTGGGGTGGAGACATGGGCAAGAGGGAGCAGGTATAAAGGGCAGTTTAAGATGGGATTGAGGCACGGTTTCGGGGTTTATAGATTCTACACTGGGGATGTTTATGCCGGGGAGTGGTCGAGTGGGCAGAGCCATGGCTGTGGAGTTCATACTTGTGATGATGGGAGCAAGTATGTTGGGGAGTTCAAGTGGGGGGTTAAGCATGGTCTTGGACACTACCATTTCAGAAATGGGGATACATATGCTGGTGAATACTTTGCGGACAAAATGCATGGATTTGGGGTATATCGATTCGCGAACGACCATCTTTATGAAGGAACCTGGCATGAGGGTAGAAGGCAAGGACTTGGAATGTATACGTTCAGAAATGGGGAAACCCAATCTGGTCATTGGCAAAATGGAGTTCTTGATGTCCCAAGCACACAGAATGCCATGTATCCAGTTTCTCCCGTTGGTGTCAATCATTCTAGAATACTTAATGCAGTGCAGGAAGCAAGGCGGGCAGCTGAGAAGGCATACGATGTGGCCAAGGTAGATGAAAGGGTGAATCGAGCAGTAGCGGCCGCGAATAGAGCAGCCAATGCAGCTAGGCTAGCCGCGCTCAAGGCTGTGCAGAAACAAATGCATCCCAATGTTAACACAGAGAGCATTAGAGTCCCCATTGTGTAA 1380 0.5007 MHHKKSEVQIGKESSGVSSDFIFNQPTHQTQTATTYKRPLLTQSLSKSPTLYQLATSSAASSSSSSSSSSSKSDNNNRIQLLLNRIQLVANRIQFQLPSIRGLRFHVTIVILSFFVFYLIIVFFPDNFLLLLEFVSAVSAAGALLFSLQLALPRLPSSIRRFRPRPLLPVFWAVGRKKQKQQGSSYGGSTGFREQVFSNGDVYQGEIRKGKCWGSGVYYYSMSGRYEGDWVDGKYEGFGVETWARGSRYKGQFKMGLRHGFGVYRFYTGDVYAGEWSSGQSHGCGVHTCDDGSKYVGEFKWGVKHGLGHYHFRNGDTYAGEYFADKMHGFGVYRFANDHLYEGTWHEGRRQGLGMYTFRNGETQSGHWQNGVLDVPSTQNAMYPVSPVGVNHSRILNAVQEARRAAEKAYDVAKVDERVNRAVAAANRAANAARLAALKAVQKQMHPNVNTESIRVPIV* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0623 459 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 268 371 - -
Amo19g0623 459 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 27 450 - -
Amo19g0623 459 SMART morn 247 268 IPR003409 -
Amo19g0623 459 SMART morn 270 291 IPR003409 -
Amo19g0623 459 SMART morn 293 314 IPR003409 -
Amo19g0623 459 SMART morn 316 337 IPR003409 -
Amo19g0623 459 SMART morn 201 222 IPR003409 -
Amo19g0623 459 SMART morn 339 360 IPR003409 -
Amo19g0623 459 SMART morn 224 245 IPR003409 -
Amo19g0623 459 Pfam MORN repeat 226 248 IPR003409 -
Amo19g0623 459 Pfam MORN repeat 341 362 IPR003409 -
Amo19g0623 459 Pfam MORN repeat 249 271 IPR003409 -
Amo19g0623 459 Pfam MORN repeat 272 293 IPR003409 -
Amo19g0623 459 Pfam MORN repeat 203 223 IPR003409 -
Amo19g0623 459 Pfam MORN repeat 318 337 IPR003409 -
Amo19g0623 459 Pfam MORN repeat 295 317 IPR003409 -
Amo19g0623 459 Gene3D - 325 388 - -
Amo19g0623 459 Gene3D - 185 232 - -
Amo19g0623 459 Gene3D - 278 324 - -
Amo19g0623 459 Gene3D - 233 277 - -
Amo19g0623 459 MobiDBLite consensus disorder prediction 1 22 - -
Amo19g0623 459 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 197 302 - -
Amo19g0623 459 PANTHER - 27 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0623 Amo-Chr19 9719278 9724245 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0623 194 374 Acyl Lipid Metabolism Gene Families AT1G60890 38.674 2.82e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0623 - - gmx:100784010 545.428