Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0617 TTTTATTATTTCTCAACTGAGCCTCTCAAGTCTCAACACAAGTGCAAGTGTCTAACCCACTCAGCATCGCCGTTACCAATCGTCATCAGGATGAATAAGCGGAAGCGAGAAGGGTTGGCTTCAAATTCTGATAATATGAGCGATGCAGAGCGCATAGTGTATAACGTAATTCACAGCAAACAAAACATGGGGATTTGGATAGCAGACATAAAGCGAGAAACATCTCTCCCTGAAAGCATGATCAAGAAATCCATTAAGATGCTTCAAACCAAGGGTGAAATCAAGGAGGTTGTTAACATTAAAAACAAGAGCAGGAAGCACTATATGGCGGCCGGTTTCGAACCGGCCGACGAAATCACGGGTGGGAGTTGGTATTCAGAAGGAAAACTTGATCAAGAGTACATATTTCGCTTAAGGCAAGTATGCCTGAATTACATCTCCAGGAATGTCATCGCGAATCGCGATGGCATTTTGGAGTTCATCAACCGAGGAGGCTATTTCTCTGGAACCACAACACAAGAGGTAGATCAGATTCTTGGAAATTTAGTTTTGGATGATAAGATTATAGAGGTGAAGAGCACTGGTTATGGGGATTATGAGAAATTCCCTGTTGGTAGAGTTTGTTATAGGTGCAAAAGCAAAGGAGGTGTTAATAATGGTGAAGGAAAATTTGGTGCCATGGCTTCAATTCCATGTGGAGTTTGTCCAAGAATTAACTTGTGTTCACCAGATGGCTATATTTCTCCCAAAACTTGTGAGTTTTATCAGAAATGGTTGGACTTCTAG 786 0.416 FYYFSTEPLKSQHKCKCLTHSASPLPIVIRMNKRKREGLASNSDNMSDAERIVYNVIHSKQNMGIWIADIKRETSLPESMIKKSIKMLQTKGEIKEVVNIKNKSRKHYMAAGFEPADEITGGSWYSEGKLDQEYIFRLRQVCLNYISRNVIANRDGILEFINRGGYFSGTTTQEVDQILGNLVLDDKIIEVKSTGYGDYEKFPVGRVCYRCKSKGGVNNGEGKFGAMASIPCGVCPRINLCSPDGYISPKTCEFYQKWLDF* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0617 261 PANTHER RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED 36 261 IPR016049 -
Amo19g0617 261 SUPERFAMILY "Winged helix" DNA-binding domain 41 111 IPR036390 -
Amo19g0617 261 Pfam RNA polymerase Rpc34 subunit 40 155 IPR007832 GO:0005666|GO:0006383
Amo19g0617 261 Pfam RNA polymerase Rpc34 subunit 171 260 IPR007832 GO:0005666|GO:0006383
Amo19g0617 261 Gene3D - 47 110 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0617 Amo-Chr19 9644530 9646418 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0617 K03025 - gmx:100783276 315.849