Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0516 ATGGCGTCTCATGGTATGTGTCCTTCAGTGAAGAACATTCTTCTTCTAGACTCTGAAGGGAAGCGTGTGGCAGTCAAGTATTACTCTGATGACTGGCCAACAAACAATGCAAAGTTAGCTTTTGAGAAGTTTGTATTTAGCAAGACTGTTAAGACAAATGCGCGTACAGAAGCTGAGGTAACGCTACTAGAGAACAATATCATTATCTACAAGTTTGTACAAGACCTGCATTTCTTTGTCACTGGTGGTGATGATGAAAATGAGCTCATTTTAGCGTCGGTTCTTCAGGGTTTCTTTGACGCGGTCACCCTTTTGTTAAGGAGCAATGTTGACAAGAGAGAGGCACTTGAGAACTTGGATCTAATTCTTTTATGTCTTGATGAAATTGTTGATGGAGGGATCATACTTGAAACAAATGGAGCTCTTATTGCTGAAAAAGTGACATCCAGTAGCTTGGATGCGGATGCTCCCTTGTCTGAGCAGACACTAACTCAAGCATGGGCTACAGCCAGAGATCATTTGACAAGAACCCTTTTAAAATGA 543 0.4144 MASHGMCPSVKNILLLDSEGKRVAVKYYSDDWPTNNAKLAFEKFVFSKTVKTNARTEAEVTLLENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREALENLDLILLCLDEIVDGGIILETNGALIAEKVTSSSLDADAPLSEQTLTQAWATARDHLTRTLLK* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0516 180 PANTHER CLATHRIN ADAPTOR COMPLEX SMALL CHAIN 6 180 - -
Amo19g0516 180 PANTHER ZETA-COAT PROTEIN 6 180 IPR039652 GO:0006890|GO:0030126
Amo19g0516 180 Gene3D - 4 150 - -
Amo19g0516 180 CDD Zeta-COP 11 146 - -
Amo19g0516 180 SUPERFAMILY SNARE-like 10 149 IPR011012 -
Amo19g0516 180 Pfam Clathrin adaptor complex small chain 10 149 IPR022775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0516 Amo-Chr19 7620513 7624015 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0516 K20472 - gmx:100775726 326.25