Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0488 ATGGCAACCTATGGCACAATCCCAACAACTTCGTCATCACCACCTTCAACCCCAAACCTCGTTTACATCTCGCGTGTCAAGAACAAGGTCAGGGCAGGCCTAGGGACTCGTCAGCCATGGAAGACCATGTTGGATCCACGATCCTTTGGAATCCCCATCACTCTATCTCAAGCAATGTCTCGTGTTCGAATCAACGTCCCTTACTTTCGCGTGAACTATGCCATGGTGGCACTTCTAATCTTATTCCTTAGTCTTTTGTGGCACCCAATTTCATTAATTGTTTTCCTTCTCTTAATGGCTCTGTGGCTCTTCCTCTATTTTCTTCGTGACCAACCACTTTTACTTTATGGTCACGTAATTGACGACCGCATTATAGTGGTCGTCATGACTATATTCACCGTGGCAGTACTGTTGTTAACGGATGCCACGGTGAATATATTGGTGGCCGTTGCCGTGGGAGTGGTGGTTATGGTGGCCCACGCTGTGTTTCGAAAGACTGAGGATCTGTTCTTGGATGAGGTTACTGGGCTAGTTCACAATGGTGGTGCTGCAGCTTAG 558 0.4749 MATYGTIPTTSSSPPSTPNLVYISRVKNKVRAGLGTRQPWKTMLDPRSFGIPITLSQAMSRVRINVPYFRVNYAMVALLILFLSLLWHPISLIVFLLLMALWLFLYFLRDQPLLLYGHVIDDRIIVVVMTIFTVAVLLLTDATVNILVAVAVGVVVMVAHAVFRKTEDLFLDEVTGLVHNGGAAA* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0488 185 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 2 174 IPR004895 -
Amo19g0488 185 Pfam PRA1 family protein 34 173 IPR004895 -
Amo19g0488 185 PANTHER PRA1 FAMILY PROTEIN 2 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0488 Amo-Chr19 7167675 7168451 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0488 K20359 - gmx:100813181 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0488 19 7167675 7168451 Amo19g0488 19 7167675 7168451 ECH
Amo19g0488 19 7167675 7168451 Amo09g0208 09 2285783 2286512 hybridization
Amo19g0488 19 7167675 7168451 Amo19g0488 19 7167675 7168451 PCT
Amo19g0488 19 7167675 7168451 Amo09g0208 09 2285783 2286512 PCT
Amo09g0208 09 2285783 2286512 Amo19g0488 19 7167675 7168451 PCT