Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0467 ATGGCTGGGATTGTTGTGGTTTTTGATTTCGACTCAACAATCATTGAGTGTGATAGTGATAATTGGGTGCTTGATGAGACTGGTTTTACTGAAAAATTCTATGAGCTTCTTCCCACCACGCTTTGGAACCCTCTCATGGATAGGATGATGGGTGAGCTTCATTCAGAAGGTAAAACAATTGAAGAAATTGTAGAAATTTTGAAGCGAACTCCATTGAATCCCCGCATTGTGCATGCTATTGAGGCAGCTTATTCCCTTGGATGTGATTTGAAGATTGTGAGTGATGCAAATATGTTCTTCATTGAGACAATTCTAAAGCATCATGGAGTGAGGAATTGTTTCTCAGAGATCATTGCAAACCCTAGCTATGTTAATGAAGAAGGGAGGCTCAGAATTTCACCTTTCCATGATTATATGAAATCTTCTCATGGATGCAGTCTTTGTCCACCAAACATGTGCAAGGGAGTGATCATAGAAAGGATCCAAAATTTGCTTTCAACAGAAGGAAAGAAGAAATTCATCTACCTTGGAGATGGAAATGGAGATTTTTGCCCTAGTTTGAAGCTCAAAGAAAGTGACTATTTGATGCCAAGAAAAGACTTTCCTTTAAGTGATTTAGTCTCCAAAGATTCCAACAAGATTAAGGCAGAGGTTCATGGATGGAAAGATGGGGAAGAGCTTGAAAATGTTTTGGTTCATATTATCAACAAAGAAATTGAAGGGAACAAAATTAATAACAATTCTACTCCGAAAATCTCAATTGATTGCAAGTTGGGATCAATTCCAATAATGGACACTACTACTTATCAACCTTTGCCTAAGGCACTGCCAGTTCGTCATTAA 843 0.3796 MAGIVVVFDFDSTIIECDSDNWVLDETGFTEKFYELLPTTLWNPLMDRMMGELHSEGKTIEEIVEILKRTPLNPRIVHAIEAAYSLGCDLKIVSDANMFFIETILKHHGVRNCFSEIIANPSYVNEEGRLRISPFHDYMKSSHGCSLCPPNMCKGVIIERIQNLLSTEGKKKFIYLGDGNGDFCPSLKLKESDYLMPRKDFPLSDLVSKDSNKIKAEVHGWKDGEELENVLVHIINKEIEGNKINNNSTPKISIDCKLGSIPIMDTTTYQPLPKALPVRH* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0467 280 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 199 IPR006384 GO:0016791
Amo19g0467 280 Pfam Putative Phosphatase 4 234 IPR016965 GO:0016791
Amo19g0467 280 Gene3D - 2 192 IPR023214 -
Amo19g0467 280 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Amo19g0467 280 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 278 IPR016965 GO:0016791
Amo19g0467 280 SUPERFAMILY HAD-like 5 186 IPR036412 -
Amo19g0467 280 PANTHER 2,3-DIKETO-5-METHYLTHIO-1-PHOSPHOPENTANE PHOSPHATASE 1 278 - -
Amo19g0467 280 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0467 Amo-Chr19 6581109 6583413 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0467 K13248 - gmx:100785357 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0468 19 6595958 6598526 Amo19g0467 19 6581109 6583413 PCT
Amo09g0227 09 2628811 2631390 Amo19g0467 19 6581109 6583413 PCT