Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0412 ATGAAAGAGAATGTGGAACTGGTATTTGAGATTTGTGTGGTGATTCCCAAGAGAGAGGCGGTTCTTAAAGGAGAGGAAGACTTCGATTGCGGCAATGTCTTTGCCAGGGAGCTTAAGAATGCAGGCTTGGTTGTTGACAGAGTTATTGGCAATTCAGATGAGTTCTTCAAGGTGGCTGCACCTTTGGAGACATTGGGGAGGGCTGCAGCTGAACTAAGAATCATGAAAAGAACTCACATTGGTATGGATTTGCAATTTGATATGGTGGAGGTTGATGCTTTTGTCAAACAGCCAGATGGTTCACTCTTTAGTTGGTATGAACGTTTTCAGTGCTACTGCCACTTAATGCACGGAATTGTAAACAACAGCAAATCAAGCAGAATCCTTAAATTCAATAGAAGAGAAATCCGTTGGGAAGTAGGAGAGCATCTCCTTCCAAAATTGGAATCAGAGATCATTATTAAGCAAATCTTTCCTTTGCATGATGACAAGATTAGAAAGAAACTCCTTAAAACCTGGGCTCTTCAATGGTGGGACTTCACAACTCAGCCAGTAGATGAAATTTATGCATATTATGGTTCAAAGATRGCAATCTATTTTGCTTTTCTTGGAATGTATACACAGTGGCTGCTCTTCCCTGCTGTGGTTGGGCTTATTGTGTACTTCATAGATTATGGGTCAGCGAATTTAGTAGTGCTCCCTGCTTTCTTCATTGCGGTCATACTATGGGCTATTATGTTTTCTCAGTTCTGGAAACGGAAAAATGCTGCACTTTTAGCCAGGTGGCCTATTACCTATGGAAATGCAGTTGATGAAGAATACAAGGTTGRTGGCATGAAGGGTAATGCTCAACCCCGACAGAACCCAATGGACCTCATAAAATTACTCGAGGCTGATAGAGTGAAGGGAAAGAAAGTGTTCACGAAATATGAGTGGTTTAATCATCTCTTGCGAATCAGGAACGATGCACTCATTATCATCAGCATAATATGCCTCCAGTTACCATTTGAGTTGGCATATGCTCATCTTTATGAAGTTCTTAATAAAGATATAATTAAGTTTGGGCTCACTGCTATTTATCTTGCTACCATTCAGTACATTACTAAGCTTGGSGGRAAGGTTTCTGTTAAACTTATCATGTTTGAACACAATGAAAACCCGGAAACACGAGCTGATAGCTTGGTCTACAAGGTGTTTGGTCTGTACTTTATGCAGACATACATTGGAATCTTTTATCACGCGTTGTTGCACCGAAACTTTGGTACTCTTCGCAAAGTTCTGATTCAGCGGCTTCTAATTTCGGAGGTGGTTCAAAACTTGATAGAAACTTCATTGCCTTATATCAACTACAACTACAAAAAATATGCCGTTCGACAAAATAAGGAGAAGGAGGAGAAAGGATCAGCTGGAACATTCGAGTTTACTTCTAGAGTAGAGAAAGAATTCCTTAAGGCTTCTTACACTGCCAGCACTGGCGAGGAGCTTGAGGATGGGTTATTTGATGATTTTTTGGAGTTGGCACTGCAGTTTGGAATGATTTTGATGTTTGCTTGCGCATTCCCACCTGCATTCGCTATGTCTGCTCTGAACAACATTATGGAAATCAGGACAGATGCTTTGAAGCTACTAGCAATGATGAAGCGGCCTGTCCCTCGTGCGTCTGCAACAGTAGGAGCCTGGCTTAACATTTTTCAGTTTCTCATATTGATGTCCATTTGCACTAATTGTGCACTTCTAGCATGGCTATTCGATGAGGAGGGAAAATGGAAGATCGAGCCGGGACTCGTGGTGATTTTGATAATGGAGCATGCTCTATTGTTGATTAAGTTTGGTTTCTCTCGTTTGGTTCCTTCGGAACCAGCTTGGGTTAGAGCAGCCCGTGCGAAAAACAGTTCGCAAGCACGAGACATGTATACTAAGAGGCTCTTGAGGACCATTTCTGGAGGAGAAAAGACAAGAGAGCTGAAGAAGATTGAGTAA 1980 0.4157 MKENVELVFEICVVIPKREAVLKGEEDFDCGNVFARELKNAGLVVDRVIGNSDEFFKVAAPLETLGRAAAELRIMKRTHIGMDLQFDMVEVDAFVKQPDGSLFSWYERFQCYCHLMHGIVNNSKSSRILKFNRREIRWEVGEHLLPKLESEIIIKQIFPLHDDKIRKKLLKTWALQWWDFTTQPVDEIYAYYGSKXAIYFAFLGMYTQWLLFPAVVGLIVYFIDYGSANLVVLPAFFIAVILWAIMFSQFWKRKNAALLARWPITYGNAVDEEYKVXGMKGNAQPRQNPMDLIKLLEADRVKGKKVFTKYEWFNHLLRIRNDALIIISIICLQLPFELAYAHLYEVLNKDIIKFGLTAIYLATIQYITKLGGKVSVKLIMFEHNENPETRADSLVYKVFGLYFMQTYIGIFYHALLHRNFGTLRKVLIQRLLISEVVQNLIETSLPYINYNYKKYAVRQNKEKEEKGSAGTFEFTSRVEKEFLKASYTASTGEELEDGLFDDFLELALQFGMILMFACAFPPAFAMSALNNIMEIRTDALKLLAMMKRPVPRASATVGAWLNIFQFLILMSICTNCALLAWLFDEEGKWKIEPGLVVILIMEHALLLIKFGFSRLVPSEPAWVRAARAKNSSQARDMYTKRLLRTISGGEKTRELKKIE* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0412 659 Pfam Calcium-activated chloride channel 188 629 IPR007632 -
Amo19g0412 659 PANTHER NGEP-RELATED 6 647 IPR007632 -
Amo19g0412 659 PANTHER BNAC06G23840D PROTEIN 6 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0412 Amo-Chr19 5450902 5455470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0412 K19327 - gmx:100792403 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0412 19 5450902 5455470 Amo19g0412 19 5450902 5455470 ECH
Amo19g0412 19 5450902 5455470 Amo09g0292 09 3330890 3335361 hybridization