Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0402 ATGCAATCTAGGTTGGAGGAAGTGAAGGACCCTTCTGCAGCAAGAATTAGTTCTTCTAGGCCCTTCCCTGTGAGGCTTCTGCAGTTCTTCTTGCTGTTTTTGGTTATAGGCATAGGTGCTTCGTTTCTTAGTATGTACATGATTCGCCATTTTGGTATTCACAATGTTGCTCTGGTGCAATCCACCTTTAGGCCTTGTTTTCAGACACCAGGAACAATAGAGAGTTTCATTATGCCTCCTGTGAATTTGATGCATAAGATGAATGACACTGAACTCTTCTGGAGAGCTTCTTTTGATACGAGGATTAAAGATTATCCGTTTCGAAGAGTTCCTAAGATTGCCTTCATGTTCTTGACCAAGGGACCCTTGCCAATGGCACCACTTTGGGAGAAGTTCTTTAAAGGCCATGAGCAGCTGTATTCTATATATGTTCATTCGCTGCCGTCTTATACACCTGATTTTCCGCCATCCTCGGTGTTTTATAGGAGGCATATCCCAAGCCAGGTGGCAGAGTGGGGAATGATGAGTATGTGTGATGCCGAAAGACGGCTGCTTGCTAACGCATTGCTCGACATCTCAAATGAATGGTTTATCCTTTTATCAGAGTCTTGCATTCCTCTCCAGAACTTCAGCATTATCTACCGATACATATCACGATCATGGTACAGCTTTATGGGAGCAGTTGACGAACCTGGTCCTTACGGGAGAGGACGCTACGAGGACAGCATGGCACCCGAGATCAACATCAGCGACTGGCGTAAGGGGTCTCAGTGGTTTGAAATCAACCGCAAACTTGCCATTCGAATAGTTGAAGACAGCACTTATTATCCAAAGCTCAGAGACTTCTGTTTGCCGCACAAATGCTATGTTGACGAGCACTATTTCCAGACAATGTTGACCATTACAATGCCTCATCTTTTGGCGAACCGGAGCCTCACTTATGTGGACTGGTCGAGGGGTGGTGCTCATCCGGCTACATTTGGAAAAGACGACATCAAGGAAGATTTCTTCAGGAGAATCAAGGTAGATCAGACATGTATTTACAATGGCCAGCCAACATCCACATGTTTCTTATTTGCCAGAAAGTTTGCTCCTAATGCTTTGGAACCTCTTTTAGATATCGCACCGAGAGTTCTAGGAATTTGA 1146 0.4476 MQSRLEEVKDPSAARISSSRPFPVRLLQFFLLFLVIGIGASFLSMYMIRHFGIHNVALVQSTFRPCFQTPGTIESFIMPPVNLMHKMNDTELFWRASFDTRIKDYPFRRVPKIAFMFLTKGPLPMAPLWEKFFKGHEQLYSIYVHSLPSYTPDFPPSSVFYRRHIPSQVAEWGMMSMCDAERRLLANALLDISNEWFILLSESCIPLQNFSIIYRYISRSWYSFMGAVDEPGPYGRGRYEDSMAPEINISDWRKGSQWFEINRKLAIRIVEDSTYYPKLRDFCLPHKCYVDEHYFQTMLTITMPHLLANRSLTYVDWSRGGAHPATFGKDDIKEDFFRRIKVDQTCIYNGQPTSTCFLFARKFAPNALEPLLDIAPRVLGI* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0402 381 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 5 379 IPR044174 GO:0016757
Amo19g0402 381 Pfam Core-2/I-Branching enzyme 113 341 IPR003406 GO:0016020|GO:0016757
Amo19g0402 381 PANTHER - 5 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0402 Amo-Chr19 5295063 5298549 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0402 - - gmx:100793448 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0402 19 5295063 5298549 Amo19g0402 19 5295063 5298549 ECH
Amo19g0402 19 5295063 5298549 Amo09g0297 09 3407508 3410965 hybridization