Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0355 ATGGATATGAATAGTAGGAAAATAGCAGTTATTCATGTTGTCCTTGTTGTGTTTGCAAGTGGGTATGGAGAAGGAGAAGCACAAGAAACACCAACAACAACAACATTAGTGCCAGCAGTGATAACATTTGGAGATTCAGTAGTGGATGTTGGAAATAATGTGAATCTCAACACTCTCTTCAAGGCTGATTACCTTCCTTATGGCAAAGATTTTGGTAACCACAAACCCAATGGCAGGTTTTGTAATGGCAAACTAGCTACTGATGTTACTGCTGAAACACTGGGATTTAAGAATTCTGCACATCCATACCTTAGTCCACGAGCATCAGGGAAGAACCTCCTTAGAGGAGTTAACTTTGCTTCAGCTGCTTCTGGTTATGATGACAACACTGCTATTTTGCATCATGCTATCCCTTTGTCACAACAATTAAATTATTACAAGGAATACCAAAGGAAACTGGCACGTGTAGTTGGAAGTAACAAATCAGCATCAATTATCAATGAAGCTTTGTACTTATTGGCTACTGGAAGTGGTGATTTTCTTCATAATTATTATATCAATCCTAAGCTCAACAAAACCACCTTCACTCCTGATAAGTACTCCTCCTACCTTGTTGCTGCATTTGAATCCTTCATTAAGGATTTGTATGGATTAGGAGCGAGGAGAATTGGAGTGGTTTCACTCCCACCATTGGGTTGTCTACCTGCTACAAGAACTTTATTTAGTTCCCATGATCACAATATTATTAATGGCGGATGTGTCTCAAGCATCAATCATGATGCTCAAACATTCAACAACAAACTCAACTCATCTGCCTTATTTCTTCAAAAACAACTTCTTGGTCTTAAGATTGTTGTCTTTGATATTTTCAAGCCTCTTTATGACCTTGTTCAGTCTCCATCAAAATTTGGTTTTGTGGAGGCAAGCAAAGGTTGCTGTGGTAGAGGGAGTGAAAGAATAAGAGTGTTCTTGTGCAATCCAAAATCATCAAGAACTTGCTCTAATGCAACTCAGTATGTGTTTTGGGATGGTGTTCATCCTTCAGAAGCTGCTAACAAAATTTTAGCTGATTCAATGCTTCTTCAAGGCATATCTCTTGTCACATAA 1107 0.3848 MDMNSRKIAVIHVVLVVFASGYGEGEAQETPTTTTLVPAVITFGDSVVDVGNNVNLNTLFKADYLPYGKDFGNHKPNGRFCNGKLATDVTAETLGFKNSAHPYLSPRASGKNLLRGVNFASAASGYDDNTAILHHAIPLSQQLNYYKEYQRKLARVVGSNKSASIINEALYLLATGSGDFLHNYYINPKLNKTTFTPDKYSSYLVAAFESFIKDLYGLGARRIGVVSLPPLGCLPATRTLFSSHDHNIINGGCVSSINHDAQTFNNKLNSSALFLQKQLLGLKIVVFDIFKPLYDLVQSPSKFGFVEASKGCCGRGSERIRVFLCNPKSSRTCSNATQYVFWDGVHPSEAANKILADSMLLQGISLVT* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0355 368 Gene3D SGNH hydrolase 28 363 IPR036514 -
Amo19g0355 368 CDD SGNH_plant_lipase_like 38 360 IPR035669 -
Amo19g0355 368 Pfam GDSL-like Lipase/Acylhydrolase 40 357 IPR001087 GO:0016788
Amo19g0355 368 SUPERFAMILY SGNH hydrolase 159 359 - -
Amo19g0355 368 PANTHER GDSL ESTERASE/LIPASE APG 8 367 - -
Amo19g0355 368 PANTHER GDSL ESTERASE/LIPASE EXL3 8 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0355 Amo-Chr19 4657579 4662032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0355 29 359 Acyl Lipid Metabolism Gene Families AT4G10950 31.045 9.29e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0355 - - gsj:114422362 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0355 19 4657579 4662032 Amo09g0059 09 682105 683146 PCT
Amo09g0059 09 682105 683146 Amo19g0355 19 4657579 4662032 PCT