Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0341 ATGGGTCGAGTGGTGGTGGTCGCGGCGGTGATTGGGGTGGCGACGGCGGTGGCTGTAGCAGCAGTGGTAGGTCGGCGGTTTGTGAGAAAATGGCGTCGTAGGGCGAAGGCATTGGCGATAGTGAAGGAGGTTGAGGAGAAGTGCGCAACCCCTATCGCCAAGCTGAGACAGGTGGCGGATGCCATGACCGTTGAGATGCACGCCGGTCTCGCATCTGAGGGTGGCAGTAAGCTCAAGATGCTCATCACTTACGTCGATAATCTCCCCACTGGGGATGAGGAAGGACTATTTTATGCATTGGACCTTGGAGGAACTAACTTTCGTGTATTACGTGTGCAACTGGGGGGAAAGGGAGGTGGTATTGTTAGTCAAGAATTTACTGAGGTGTCAATTCCACCTAAGTTGATGGTTGGATCATCAAGTGCACTATTTGAATATATTGCATCAAAACTTGCAAAATTTGTTGCCGAAGAAGGACCAGATTTTCAAATTCATCCTGGTAGACAGAGGGAACTAGGTTTCACCTTTTCCTTCCCTGTCATGCAAACATCAATTGATTCTGGGAACCTTATAAAGTGGACAAAAGGCTTCTCCATAGATGATACAGTTGGTAAGGATATTGTGGCAGAATTGACAAAAGCCATGGAGAAGCAAGGTCTTGATATGCGTGTAACAGCTCTGGTCAATGATACAGTTGGAACATTAGCTGGAGGTCGATACACAGACAAAGATGTCATTGCTGCTGTTATTTTAGGTACTGGAACAAATGCAGCATATGTGGAGCGTGCTCAAGCAATACCAAAATGGCATGGCCTTTTGCCCAAGTCCGGAGAAATGGTTATTAACATGGAGTGGGGAAATTTCCGGTCTTCACATCTTCCCTTAACCGAGTTTGATCATGCATTAGATATGGAGAGTTTAAACCCTGGTGAACAGGTTTATGAGAAGATAATTTCTGGTATGTATTTGGGAGATATTGTTCGAAGAGTGCTATGTAAAATGGCTGAAGAAGCTTCCTTTTTCGGGGACACCGTTCCTCCAAAGTTGAAAGTTCCGTTCACATTAAGGACACCTGACATGTCTGCAATGCATCATGACACATCTGCTGATCTCAGTGTAGTTGGGAACAAACTGAAGACCATTTTTGAGATACAAGATAGTTCATTGGAATCAAGGAAGGTGGTTATTGAGCTCTGCAACATTATTGCTACACGCGGTGCTCGTCTTGCCGCTGCCGGCATGTTGGGTATCCTGAAGAAGCTGGGGAAAGACACCCTCAATGACAGTGAGGGTCAAAGGTTTGTGATAGCCATGGATGGTGGATTGTATGAGCATTATGATGCATACAGCAAGTGCCTAGAGGATACCGTGGCTGAGTTGCTTGGAGAAGTTGTCTCACAAAACATTGTCATACAGCACTCCATGGATGGTTCTGGAATTGGTGCTGCTCTTCTTGCTGCTTCTCATTCTCAGTACCTTGAAGGCTAA 1488 0.4603 MGRVVVVAAVIGVATAVAVAAVVGRRFVRKWRRRAKALAIVKEVEEKCATPIAKLRQVADAMTVEMHAGLASEGGSKLKMLITYVDNLPTGDEEGLFYALDLGGTNFRVLRVQLGGKGGGIVSQEFTEVSIPPKLMVGSSSALFEYIASKLAKFVAEEGPDFQIHPGRQRELGFTFSFPVMQTSIDSGNLIKWTKGFSIDDTVGKDIVAELTKAMEKQGLDMRVTALVNDTVGTLAGGRYTDKDVIAAVILGTGTNAAYVERAQAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEFDHALDMESLNPGEQVYEKIISGMYLGDIVRRVLCKMAEEASFFGDTVPPKLKVPFTLRTPDMSAMHHDTSADLSVVGNKLKTIFEIQDSSLESRKVVIELCNIIATRGARLAAAGMLGILKKLGKDTLNDSEGQRFVIAMDGGLYEHYDAYSKCLEDTVAELLGEVVSQNIVIQHSMDGSGIGAALLAASHSQYLEG* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0341 495 Pfam Hexokinase 41 240 IPR022672 GO:0005524|GO:0005975|GO:0016773
Amo19g0341 495 ProSitePatterns Hexokinase domain signature. 172 197 IPR019807 GO:0004396|GO:0005524|GO:0006096
Amo19g0341 495 PRINTS Hexokinase family signature 98 114 - -
Amo19g0341 495 PRINTS Hexokinase family signature 172 197 - -
Amo19g0341 495 PRINTS Hexokinase family signature 224 240 - -
Amo19g0341 495 PRINTS Hexokinase family signature 247 261 - -
Amo19g0341 495 PRINTS Hexokinase family signature 312 334 - -
Amo19g0341 495 PRINTS Hexokinase family signature 395 417 - -
Amo19g0341 495 PRINTS Hexokinase family signature 472 488 - -
Amo19g0341 495 PANTHER HEXOKINASE 1 493 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Amo19g0341 495 SUPERFAMILY Actin-like ATPase domain 31 242 IPR043129 -
Amo19g0341 495 Gene3D - 83 486 - -
Amo19g0341 495 PANTHER HEXOKINASE-1 1 493 - -
Amo19g0341 495 SUPERFAMILY Actin-like ATPase domain 244 492 IPR043129 -
Amo19g0341 495 CDD NBD_sugar-kinase_HSP70_actin 99 261 - -
Amo19g0341 495 ProSiteProfiles Hexokinase domain profile. 35 487 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Amo19g0341 495 Pfam Hexokinase 247 487 IPR022673 GO:0005524|GO:0005975|GO:0016773
Amo19g0341 495 Gene3D - 61 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0341 Amo-Chr19 4395039 4400524 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0341 K00844 - zju:107435312 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0341 19 4395039 4400524 Amo19g0341 19 4395039 4400524 ECH