Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0295 ATGGAAAGTAACCTACCAGTGATAGCAAAGAAAGTGTGGAACATAATACGTGTTGCCTTCTACATGTTAAGGAAGGGAATTTCAAAAGCCAAACTCATGTTAGAACTCAACATGGTTCTCAAACGCCGCCGCAAACTCGCCGGAAAAGCCATCGCCAACCTCATGATGTTCCACCACCACCAACACGCCGACATGCACCTCCAACAATTCTCCACCACCAGGGAGTACGAGTTCAGCTGCAGCAACACGCCCAATAACTTCTTCTCCAAGCTCCACCGCAAGAACAAGCTGTTCACGCGCTCCCACGCGCCTCACGAGTGCGACGACGACGTCGTGACGGTCAGTGCTGTAAAGGCGGTGTTAGAGATCCTAAACAACAACAATGATAATGTGGTCGAGGCATCCCCGGCGCTACCGGGGTTCGGCCGGAGCCCTACCGTGAGTCGGTTAAGGGTAACGGATTCACCGTTCCCAATGAATGTCGACACAGAATACGATAAAGATCATCAAGTGGACAAGGCTGCCGAAGAATTCATTAAGAGGTTCTACAAAGAGTTGAGGAAGCAACCCTAA 573 0.5044 MESNLPVIAKKVWNIIRVAFYMLRKGISKAKLMLELNMVLKRRRKLAGKAIANLMMFHHHQHADMHLQQFSTTREYEFSCSNTPNNFFSKLHRKNKLFTRSHAPHECDDDVVTVSAVKAVLEILNNNNDNVVEASPALPGFGRSPTVSRLRVTDSPFPMNVDTEYDKDHQVDKAAEEFIKRFYKELRKQP* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0295 190 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 189 - -
Amo19g0295 190 Pfam Cotton fibre expressed protein 169 189 IPR008480 -
Amo19g0295 190 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0295 Amo-Chr19 3541853 3542712 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0295 - - gmx:100802625 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0295 19 3541853 3542712 Amo19g0295 19 3541853 3542712 ECH
Amo19g0295 19 3541853 3542712 Amo19g0295 19 3541853 3542712 PCT