Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0294 ATGGCACCACATGGAGAATCTTTGCCTAGTAGCACTTTCGCTACTAGGAGCAACAACAACATATTATCAAAGCCACCAAAGCTTTCATCTGAGAATCTTCAAAGAACCATCTCGGACATCTCCTTCGAGCTAGCGAAAGAAGCGATGATTGATTCTTCTAAGAATAATAACAATACCAAGCAGCTTTCGTCGATATCCGAGGTTGAAGTAGATGGAAAGTGTGAGTGTTGTGGCATGTCTGAGGAGTGTACTCTTGAGTACATGGACCGCGTCCGCGACAAGTTCCTAGGAAAGTTTGTGTGTGGTTTGTGTTCTGAGGCGGTGAAGGAAGAGTTGGAGAAAAATGGAGGGAAGAAAGAAGAGGCTTTGAGTTCACACATGAGTGCATGTGTTAGGTTTAACAAGTTTGGAAGGGCATTTCCGGTATTGTTTCAAGCTGAAGCAATGAAGGAGATGCTTAAGAAGAGTAAGTTTGATGGAAAAATTAGGGCTAAATCTATTAGCCCTAGAGAGAAAGGAGGAGGGATCATCAATAAAGGAGGGCTTGCTCGTAGTTCAAGTTGTATTCCAGCAATCACAAAAGAGTTAAATGAAATCAAAATAACTCATTAA 612 0.4167 MAPHGESLPSSTFATRSNNNILSKPPKLSSENLQRTISDISFELAKEAMIDSSKNNNNTKQLSSISEVEVDGKCECCGMSEECTLEYMDRVRDKFLGKFVCGLCSEAVKEELEKNGGKKEEALSSHMSACVRFNKFGRAFPVLFQAEAMKEMLKKSKFDGKIRAKSISPREKGGGIINKGGLARSSSCIPAITKELNEIKITH* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0294 203 PANTHER CASP-LIKE PROTEIN (DUF1677) 10 200 - -
Amo19g0294 203 PANTHER OS01G0745000 PROTEIN 10 200 IPR012876 -
Amo19g0294 203 MobiDBLite consensus disorder prediction 1 28 - -
Amo19g0294 203 MobiDBLite consensus disorder prediction 8 28 - -
Amo19g0294 203 Pfam Protein of unknown function (DUF1677) 72 155 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0294 Amo-Chr19 3518063 3518939 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0294 - - aip:107616639 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0294 19 3518063 3518939 Amo19g0294 19 3518063 3518939 ECH
Amo19g0294 19 3518063 3518939 Amo19g0294 19 3518063 3518939 PCT