Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0287 ATGGAATCGAGTCGAAGAGCTGTGGAGTCGTATTGGAGGTCGAGGTTGATCGATTCAGCTACTTCGGATGAAGATAAGGTCACTCCGGTTTACAAATTGGAGGAAATCTGCGATCTTTTGAGGACATCGCATGTCAGTATTGTGAAAGAGCTTTCAGAGTTTGTGTTGAAGAGACTCGATCATAAGAGCCCAATTGTGAAACAGAAGGCTTTAAGATTGATAAAGTATTGTGTTGGAAAATCTGGTGTAGAGTTTAGAAGGGAAATGCAGAGACATTCGGTGGCAGTTCGTCAATTGTTTCATTACAAGGGACAGTTGGATCCTCTGAAAGGTGATGCACTAAATAAGGCTGTGCGAGACACGGCTCATGAGGCTATCTCTGCCATCTTTTCAGAAGAAAATAAGCCAGTGGCAGCGCCTACTGAAGATATTAACAGGCGAATACAAGGGTTTGGGAATACCAACTATGAACCACCATCAGAAGATAAGAAATCTTTTATTAGTGAGGTAGTCGGTATTGGAAGTGCATCAATTAAGCAAGGACTTAGTAGCTTAACACAGGGACATTCACTAATGAAGAATGATACTGGAAGCTACAGGAGTCCAAATCTTCGAAGGTCATTGACCATAGAAGAAGAACGTGGTGAGAGATATGAACCGGTTAAATACCGAAATGAAAATCAGAGTAGTTTTGAGCTTCCAAAGTCCAGTGGTCCTTGGAGTCAGGATTCAAGGGTAACTAAGACGGAAACATCAAATGGTGATTCTGGTGCAAGTTATTCGGAAGGTAAGACAAGGGAGGATAGGTTGCTGGAGACAATTGTAACTTCAGGGGGTATTCGGCTACAACCCACTCGAGATGCTATTCAAGTTTTCCTAACAGAGGCTGCCAAGTTGGATGCTGTGGCTTTATGTCATGCCCTTGAACCAAAGCTTCAATCTCCCATGTGGCAGGTTCGCATGAAAGCTGTTTGCGTGCTCGAAGCCATGCTTAGAAAGAAGGATGATGATCATTTTTCAGTTGTTTTTTCTTACTTCACTGAAAATAGTGATGCAGTGGTGAAATGTTCAGAATCTCCCCAATCTTCTTTGAGGGAAAAGGCAGTCAGGGTTATTGGGCTTCTAGGTGTAGGCCACTCAAATAGCTTTGGTATTAATTCAGAGAAGGCCGTGAAGACAGAAAGTACTACTGCTGTTGAGTTGCCTGACTTGATTGACACTGGAGATTCAAATGATAATCTCGAAATGGAGAATACTACAAAGAATGTGCTTGATCAGAATATAGAAAATTTGACATCATCCAGACCTCCTCTCGTTGATGATTTATTTGGAGATTTTAGTGGTTCTGTTGGAGCTACTAATGAACCAAAAAATGATGACGACCCTTTTGCTGGTGTATCATTTCATACAAGTGAGAAGAAAGAACATGCAGCTGATCTCTTTTCTGGGATGGATGTTGGTGGTGATAAACCAGTTGATCATGGAGGTCGTGGACAGACAAGTAGGAGTGATCCCCAACCCTTTGACCTCTTTGCTTCCAATCCCGAGCAAACAAATCATAAAGAATTTGTTGGTGATTTAATGGGTGGCTTGTCATTAGAGGAAAATACCTCAAGTTCAAATCATAAACCATCTCCCCCTGCGACAACAATGCAATCGGAATCTTTATTTTCGGGTTTAAATAGTCAGGTTCCAGATAATAATTTAGGTGGCATGTTGGGTTCTCAGACAGTTGGGTTCAATGTAAATCCCATGTTTCCTACGGGTCAGCTGCCTTATGGTGTGCAACCCGGTATGATGTTGAACCACCCGTATGCTTCTCAGCCCTTTAATTATGGTGCCATGGGGACTCTCTTGGCTCAGCAGCAACTCCTTGCAACAATGGCTAATTTCCAACACCTTAATAATGCCAACATGCAAAATGCTAGTGCTGCTCAAATGACTGGACCCAATGGAAGTACACCTCTTCCCGATATATTTCAACCAAATTTCTCAAACCAACCTCCTACCTCACTGATGAACAATTCAAAGAAAGAAGATACTAAAGCATTTGACTTTATCTCGGACCACATTGCTTCTGCCCGTGATTCAAGGAGAGTGATTTGA 2106 0.4221 MESSRRAVESYWRSRLIDSATSDEDKVTPVYKLEEICDLLRTSHVSIVKELSEFVLKRLDHKSPIVKQKALRLIKYCVGKSGVEFRREMQRHSVAVRQLFHYKGQLDPLKGDALNKAVRDTAHEAISAIFSEENKPVAAPTEDINRRIQGFGNTNYEPPSEDKKSFISEVVGIGSASIKQGLSSLTQGHSLMKNDTGSYRSPNLRRSLTIEEERGERYEPVKYRNENQSSFELPKSSGPWSQDSRVTKTETSNGDSGASYSEGKTREDRLLETIVTSGGIRLQPTRDAIQVFLTEAAKLDAVALCHALEPKLQSPMWQVRMKAVCVLEAMLRKKDDDHFSVVFSYFTENSDAVVKCSESPQSSLREKAVRVIGLLGVGHSNSFGINSEKAVKTESTTAVELPDLIDTGDSNDNLEMENTTKNVLDQNIENLTSSRPPLVDDLFGDFSGSVGATNEPKNDDDPFAGVSFHTSEKKEHAADLFSGMDVGGDKPVDHGGRGQTSRSDPQPFDLFASNPEQTNHKEFVGDLMGGLSLEENTSSSNHKPSPPATTMQSESLFSGLNSQVPDNNLGGMLGSQTVGFNVNPMFPTGQLPYGVQPGMMLNHPYASQPFNYGAMGTLLAQQQLLATMANFQHLNNANMQNASAAQMTGPNGSTPLPDIFQPNFSNQPPTSLMNNSKKEDTKAFDFISDHIASARDSRRVI* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0287 701 MobiDBLite consensus disorder prediction 481 506 - -
Amo19g0287 701 Pfam ENTH domain 16 129 IPR013809 -
Amo19g0287 701 SMART VHS_2 13 148 IPR002014 GO:0035091|GO:0043130
Amo19g0287 701 CDD ENTH_like_Tepsin 13 132 IPR035802 -
Amo19g0287 701 MobiDBLite consensus disorder prediction 531 553 - -
Amo19g0287 701 SUPERFAMILY ARM repeat 33 391 IPR016024 -
Amo19g0287 701 MobiDBLite consensus disorder prediction 187 265 - -
Amo19g0287 701 PANTHER UNCHARACTERIZED 1 694 IPR039273 -
Amo19g0287 701 MobiDBLite consensus disorder prediction 532 553 - -
Amo19g0287 701 MobiDBLite consensus disorder prediction 224 260 - -
Amo19g0287 701 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
Amo19g0287 701 MobiDBLite consensus disorder prediction 187 205 - -
Amo19g0287 701 Gene3D - 2 139 IPR008942 -
Amo19g0287 701 MobiDBLite consensus disorder prediction 206 223 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0287 - - gmx:100803368 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0287 19 3390624 3395712 Amo19g0287 19 3390624 3395712 ECH