Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0285 ATGGCTTCCTCTCTCCGTCTCCAAAACCCCACTTTCCACAAACCCCACGCTCCACCACCAACATGTACTCCCACGCGCCACCGCATCAACTACGTTCCCGTGCGGTGCGGCGGCCCGCGGTCACAGCGCGGACCCTTACTCAAAGGTCGAATCCTAAGCATCGAAGCAATCCAAGCCATACAAACCATAAAACGAATCCACCGAACCAACCCTCCTAACCACCAAACCCTAATATCCAACACCCTCACGCGCCTCATCAAAAACGACCTACTCGCCACTCTACGTGAGCTTCTACGCCAGCAACAGTGCGCTCTCGCGCTCCGCGTGTTCACCGCCGTTAGATCAGAGTACGACGCCGATCTCACGCTCTATGCCGAGATGGTCAACGCGCTCGCAAGTAAAAGTATGGGTGACGACGTGGACCGTCTGATTTTGGAGTTGGATGGGATTGAGTTCGCTGACGTGGCGGATCAGAAGGGGATGGTGAGTTTGATCAAGGCCGTTGTTGGTGCTGGGAGGAGGGAATCAACGGTCAGGATTTACGAGATGATGAAGAAGGGTGGGTGGTGTGAGAATGTTGAACCTGATGAGTATTTGGTTAATGTTTTGGTTAATGGGCTCAAGGGTTTTGGTGAAATGGAACTTGCTAAGCAGGTTCAGAATGAGGCTAATAGGGCTTTTGCTAGGTTCTCTAGGCCCAATTTGGAGTCATTCAGATTGTAG 723 0.5242 MASSLRLQNPTFHKPHAPPPTCTPTRHRINYVPVRCGGPRSQRGPLLKGRILSIEAIQAIQTIKRIHRTNPPNHQTLISNTLTRLIKNDLLATLRELLRQQQCALALRVFTAVRSEYDADLTLYAEMVNALASKSMGDDVDRLILELDGIEFADVADQKGMVSLIKAVVGAGRRESTVRIYEMMKKGGWCENVEPDEYLVNVLVNGLKGFGEMELAKQVQNEANRAFARFSRPNLESFRL* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0285 240 MobiDBLite consensus disorder prediction 1 24 - -
Amo19g0285 240 Gene3D Tetratricopeptide repeat domain 51 226 IPR011990 GO:0005515
Amo19g0285 240 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 13 233 IPR044190 GO:0000373|GO:0003723|GO:0009658
Amo19g0285 240 PANTHER PROTEIN THYLAKOID ASSEMBLY 8, CHLOROPLASTIC 13 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0285 Amo-Chr19 3369065 3370128 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0285 - - cam:101492614 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0285 19 3369065 3370128 Amo19g0285 19 3369065 3370128 ECH