Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0244 ATGAAAGAACACATAAAGAGTCCAGGCCTAGTGTGGCCCAAGGACCAAGCCCAAGGTCCAAAGCCCATTTATGATTTCCTGGAATGCATGCTCTCTGCTAGTGGAAGAGCATTGCCTTTTGCTTCTGGTTTTGTGGGACAAGCAGAGGCAAGAGAAGCATGTGGCCTTGTGGTTGACATGATAAGGCAGAAGAAGATGGCTGGCAGGGCACTCCTCCTTGCCGGTCCACCCGGTACCGGCAAGACTGCATTGGCACTAGGGATAAGTCAAGAGCTTGGAACCAAGGTTCCATTTTGCCCTATGGTTGGCTCAGAAGTATACTCGTCCGAGGTAAAGAAGACAGAGGTTCTGATGGAGAATTTTCGACGGGCTATTGGTCTGCGTATCAAGGAAAACAAGGAAGTTTATGAAGGAGAGGTAACCGAGCTCTCCCCTGAAGAAACTGAGAGTGTAACAGGCGGTTATGGTAAAAGTATAAGCCATGTAATAATTGGATTGAAAACTGTGAAAGGAACCAAGCAACTGAAGTTGGACCCCACCATATATGATGCCTTGATTAAGGAAAAGGTAGCTGTTGGAGATGTTATATACATCGAAGCAAATAGTGGAGCTGTGAAAAGGGTGGGCCGAAGTGATGCTTTCGCTACAGAGTTTGACCTTGAAGCAGAAGAGTATGTCCCACTTCCTAAGGGAGAGGTTCACAAGAAAAAAGAGATTGTTCAGGATGTAACGCTACATGATCTGGATGCTGCCAATGCACGACCTCAAGGTGGGCAAGATATTCTGTCTCTTATGGGACAGATGATGAAACCTAGGAAAACAGAAATCACTGACAAGCTGAGACAAGAAATTAACAAGGTTGTCAACCGATATATTGATGAAGGTGTAGCAGAGCTTAGCTCGCTCTCTCCAATAGTAATTTTTGCTACAAACAGAGGGATATGCAATGTGAGAGGGACCGACATGACCAGCCCTCATGGCATACCTGTTGACCTCTTGGATAGGTTGATTCTAGCTATTCGTGCTCAAGTAGAGGAGCTGGTTGTTGATGAGGAAAGTTTAGCATTCCTCGGGGAAATTGGACAACGGACATCTTTAAGGCATGCTGTTCAACTTCTATCACCTGCCAGCGTTGTATCAAAAATGAATGGCCGAGACAGCATCTGCAAGGGGGATCTTGATGAAGTTTGTTCGCTATACTTGGACGCTAAGTCATCAGCCAGGCTACTTCAAGAGCAGCAGGATAAATACATCTCATAA 1260 0.4571 MKEHIKSPGLVWPKDQAQGPKPIYDFLECMLSASGRALPFASGFVGQAEAREACGLVVDMIRQKKMAGRALLLAGPPGTGKTALALGISQELGTKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELSSLSPIVIFATNRGICNVRGTDMTSPHGIPVDLLDRLILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQLLSPASVVSKMNGRDSICKGDLDEVCSLYLDAKSSARLLQEQQDKYIS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0244 419 Gene3D - 32 338 IPR027417 -
Amo19g0244 419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 400 IPR027417 -
Amo19g0244 419 PANTHER RUVB-RELATED REPTIN AND PONTIN 300 419 IPR027238 GO:0008094
Amo19g0244 419 PANTHER RUVB-RELATED REPTIN AND PONTIN 31 299 IPR027238 GO:0008094
Amo19g0244 419 SMART AAA_5 67 352 IPR003593 -
Amo19g0244 419 Gene3D - 124 249 IPR042487 -
Amo19g0244 419 Gene3D - 339 419 - -
Amo19g0244 419 PANTHER RUVB-LIKE HELICASE 300 419 - -
Amo19g0244 419 PANTHER RUVB-LIKE HELICASE 31 299 - -
Amo19g0244 419 Pfam TIP49 AAA-lid domain 337 402 IPR041048 -
Amo19g0244 419 CDD AAA 45 135 - -
Amo19g0244 419 Pfam TIP49 P-loop domain 300 338 IPR010339 GO:0005524
Amo19g0244 419 Pfam TIP49 P-loop domain 33 299 IPR010339 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0244 Amo-Chr19 2827889 2831665 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0244 K04499 - gmx:102659805 709.138