Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0239 ATGGCTTCCCTTGCAACCTTAGCTGCTGTTCAACCAGCTGCAGTCAATGGACTTGCTGGAAGTTCCCTTAATGGAACTAAGCTCTCTTTCAAATCCTCTCACCAAACTTTAAAATCCAAGAAATTCAGGAGTGGTGCTGTGGTAGCAAAGTATGGTGACAAGAGTGTGTACTTTGATTTGGAGGACATTGGCAACACTACAGGGCAGTGGGATTTGTATGGTTCAGATGCACCTTCACCTTACAACCCTCTTCAGAGCAAGTTCTTTGAGACATTTGCTGCTCCATTCACAAAGAGGGGATTGTTGCTCAAGTTCTTGATCTTGGGAGGTGGTTCAACACTTGCATACTTCAGTGCCACTGCTTCAGGTGACATTCTCCCAATCAAGAAGGGCCCACAACTCCCACCAAAGCTTGGTCCACGTGGCAAGATCTAA 435 0.4621 MASLATLAAVQPAAVNGLAGSSLNGTKLSFKSSHQTLKSKKFRSGAVVAKYGDKSVYFDLEDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDILPIKKGPQLPPKLGPRGKI* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0239 144 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC-LIKE 1 144 - -
Amo19g0239 144 Pfam Photosystem I reaction centre subunit VI 7 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
Amo19g0239 144 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC 1 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
Amo19g0239 144 Gene3D - 98 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0239 Amo-Chr19 2764691 2766413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0239 K02695 - gmx:100811201 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0239 19 2764691 2766413 Amo09g0062 09 723017 724156 hybridization