Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0164 ATGCGACGCTCTGCATCTAAGAAAACGGGTCAATCCAATTCAATCAATTCCTCTGCTGCTGATCTATTCCGTTCAGCCTCGAGTAAAGCGAGCTCAAAGGAATTGGAAAGAATTGATAGTCTATTTTATACATATGCCAATGGATCTGGGGTGATTGACCCAGAAGGAATTGAAACCCTCTGTGCTGATATGGAGGTGGATCATACTGATGTGAGGATCTTGATGCTGGCATGGAAAATGAAAGCTGACGAGCAAGGATATTTTACTTTGGATGAGTGGAGGAGAGGCTTAAAAGCACTAAGGGCTGATACAGTAAGTAAATTGAAGAAAGCACTTCCAGACTTGGAAAAAGAGGTTAGGAGGCCGTCAAATTTTGCAGATTTCTATTCTTATGCTTTCCAATATTGTTTAACAGAGGAGAAACAGAAAAGCATTGATATAGAGAGCATCTGTCAATTACTTACACTTGTTTTGAGTTCAACATTTCCAACCCAAGTCAACTTATTTGTGGAATATTTGAAGACTCAAGATGATTACAAGGTCATAAACATGGATCAATGGATGGGATTTTTCCGGTTTTGCAATGAGATAAGTTTCCCAGCGCTTGATAACTACGATCCAGAACTTGCATGGCCATTGATCCTCGACAATTTCGTTGAGTGGCTGCGAGAAAACCAAAAGTGA 684 0.402 MRRSASKKTGQSNSINSSAADLFRSASSKASSKELERIDSLFYTYANGSGVIDPEGIETLCADMEVDHTDVRILMLAWKMKADEQGYFTLDEWRRGLKALRADTVSKLKKALPDLEKEVRRPSNFADFYSYAFQYCLTEEKQKSIDIESICQLLTLVLSSTFPTQVNLFVEYLKTQDDYKVINMDQWMGFFRFCNEISFPALDNYDPELAWPLILDNFVEWLRENQK* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0164 227 Gene3D Cullin, PONY binding domain 122 227 IPR042460 -
Amo19g0164 227 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 1 226 - -
Amo19g0164 227 SUPERFAMILY EF-hand 32 195 IPR011992 -
Amo19g0164 227 Gene3D - 31 120 - -
Amo19g0164 227 ProSiteProfiles DCUN1 domain profile. 33 223 IPR005176 -
Amo19g0164 227 PANTHER RP42 RELATED 1 226 IPR014764 -
Amo19g0164 227 Pfam Cullin binding 107 221 IPR005176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0164 Amo-Chr19 1772764 1776557 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0164 K17824 - gmx:100499856 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0164 19 1772764 1776557 Amo19g0164 19 1772764 1776557 ECH