Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0163 ATGATGCTGTGCAGGAAAAGTTCTCGAAACGGCGTCGTTTCGGGATCGGTGCCGGTGTACCTGAACGTCTACGATCTTACGCCAATTAACGGTTACGCTTACTGGTTCGGACTCGGAGTGTACCATTCCGGCGTCGAAGAACGAACTGTCTCAGATCTAGGATCTGTTAGTGAAAAGAAAAATGGTAGTAATCTGTTTGGTTTTGGTTTTGAAATTTTGTTGTTTGCAGTGCACAGTGTGGAGTATGCATTTGGGGCTCACGAGTACTCATCGACGGGGATATTCGAAGGGGAACCAAAGAGGTGTGAAGGGTTTAGATTCAGGAAGACAATACTGATTGGGAAGACAGATATGGGGCCGGATGAAGTGAGAGCGGTGATGGAAGAACTTGCAGCTGACTACAGAGGCAATGCCTACAACTTGATCACCAAAAACTGTAACCATTTCTGCAATGATACTTGTCTTAGGCTAACCGGAAATCCTATTCCCAGTTGGGTCAATCGTCTTGCCCGAATTGGTTTTATGTGCAACTGTGTTCTTCCCGTGACATTGAACTCGACCAAAGTTAGGCATCATAGAATAGAAGACAAGCCATGTGAAGCAGAGAAGCAAGCATTGAAAACGTCCTCTACTTCCTCGGGGATTCGCAGGGGAAGAAGTAGAACTAGGCGAGCCCTTCCACCATCGTCGCCTTTGATTATTGGCTCTTCTTCTTCGTCATAA 723 0.4633 MMLCRKSSRNGVVSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGVEERTVSDLGSVSEKKNGSNLFGFGFEILLFAVHSVEYAFGAHEYSSTGIFEGEPKRCEGFRFRKTILIGKTDMGPDEVRAVMEELAADYRGNAYNLITKNCNHFCNDTCLRLTGNPIPSWVNRLARIGFMCNCVLPVTLNSTKVRHHRIEDKPCEAEKQALKTSSTSSGIRRGRSRTRRALPPSSPLIIGSSSSS* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0163 240 ProSiteProfiles PPPDE domain profile. 17 184 IPR008580 GO:0008233
Amo19g0163 240 MobiDBLite consensus disorder prediction 200 240 - -
Amo19g0163 240 Gene3D PPPDE domains 55 198 IPR042266 -
Amo19g0163 240 PANTHER F23A5.4 PROTEIN 5 239 - -
Amo19g0163 240 PANTHER DESUMOYLATING ISOPEPTIDASE 5 239 IPR008580 GO:0008233
Amo19g0163 240 Pfam PPPDE putative peptidase domain 18 181 IPR008580 GO:0008233
Amo19g0163 240 SMART DUF862_2a 17 185 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0163 Amo-Chr19 1767018 1769314 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0163 K22763 - gmx:100796813 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0163 19 1767018 1769314 Amo19g0163 19 1767018 1769314 ECH