Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0158 ATGTTTCTACAAAAGCTGAGCCCTGAGAGTGATCTAGAATCATGGATTGATCGATTACTGAAACAACTCCAACAAGTAAACTCACAGATGCAAGCTTTGGTATCAACTGGTGGGTCAGAAGTGGTTTCTCATACTTTGAATAGACACCAAGAAATTCTTCAAGATCTCACCCAGGAGTTTTTTCGCCTTCGCAAAAGTCTTCGGGCTAAGCAAGAACATGCTTCACTACTGGAGGATTTTAAAGAATTTGATCGAACTCGATTAGACTTGGAAGAGGGTTCTGAACAGCATTCACTCCTAAAAGAACATGCATCCATCAGTAGAAGTACAGGACAGATGGACAATGTTATTTCACAAGCACAAGCAACACTTGGCACGCTTGTACTCCAACGTTCAACATTTGGTGGCATCAATTCAAAACTCAGCAATGTTAGCAGTCGCCTCCCAACGGTAAATACCATACTTTCGGCAATAAAGCGAAAAAAGTCAATGGATACCCTTATACTTTCTCTAGTTGCATCAGTTTGCACCTTTCTCATTGTCATCTACTGGCTAACCAAATGA 564 0.4096 MFLQKLSPESDLESWIDRLLKQLQQVNSQMQALVSTGGSEVVSHTLNRHQEILQDLTQEFFRLRKSLRAKQEHASLLEDFKEFDRTRLDLEEGSEQHSLLKEHASISRSTGQMDNVISQAQATLGTLVLQRSTFGGINSKLSNVSSRLPTVNTILSAIKRKKSMDTLILSLVASVCTFLIVIYWLTK* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0158 187 PANTHER GOS-28 SNARE- RELATED 9 187 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Amo19g0158 187 Coils Coil 16 36 - -
Amo19g0158 187 Pfam Snare region anchored in the vesicle membrane C-terminus 98 162 - -
Amo19g0158 187 PIRSF Golgi_SNARE 3 186 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Amo19g0158 187 PANTHER GOLGI SNAP RECEPTOR COMPLEX MEMBER 1 9 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0158 Amo-Chr19 1655060 1658233 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0158 K08495 - twl:119990339 299.286