Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0154 ATGCCGCTTCTTCCGAAGAGCGAGACAATCCAGATCCGGGAGGTTTGGGACTCTAATCTTGAAGAAGAATTCGCCCTAATCCGCGACATCGTCGATGACTACCCTTACGTGGCAATGGACACAGAGTTCCCCGGGATCGTTCTCCGCCCCGTCGGAAACTTCAAGAACAGCCACGACTACCATTACCAAACCCTAAAGGACAACGTGGACATGCTCAAACTCATCCAATTAGGTCTCACATTCTCCGATGAATTCGGCAACCTTCCCGCCACCGATGCCTCCGGCGAAGACCAGCGCAGCTGCATATGGCAGTTCAACTTCCGGGAATTCAACGTCAACGAGGACGTTTTCGCGAACGACTCAATCGAGCTTCTTCGCCAGAGCGGAATCGATTTCAGCAAGAACAACCGAGACGGCATTGACGCTCGTCGTTTCGGTGAGCTTCTAATGTCTTCTGGAATAGTCCTAAACGACGCCATTCACTGGGTTACGTTCCACAGCGGTTACGATTTCGGTTACCTCTTGAAGCTTCTCACGTGCCAGAACCTTCCAGAAACACAAGCTGGTTTCTTTAATTTGATCAACATGTATTTCCCTAGGGTTTATGATATTAAGCATTTGATGAAGTTTTGCAATTCATTGCACGGTGGTTTGAATAAGCTTGCGGAGTTGTTGGAGGTTGAGAGGGTTGGGATTTGCCACCAGGCCGGTTCCGATAGCTTGCTTACGTCAAGCACTTTTCTGAAGCTGAAGGAGAATTTCTTCAGTGGGTCGCTGGAGAAGTATGCCGGTGTTTTGTTTGGGTTGGGCAACGACGGCGGCAGTGGCGGTTATAGCTCTAATTCTTATGTTCATTGA 858 0.493 MPLLPKSETIQIREVWDSNLEEEFALIRDIVDDYPYVAMDTEFPGIVLRPVGNFKNSHDYHYQTLKDNVDMLKLIQLGLTFSDEFGNLPATDASGEDQRSCIWQFNFREFNVNEDVFANDSIELLRQSGIDFSKNNRDGIDARRFGELLMSSGIVLNDAIHWVTFHSGYDFGYLLKLLTCQNLPETQAGFFNLINMYFPRVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTSSTFLKLKENFFSGSLEKYAGVLFGLGNDGGSGGYSSNSYVH* 286
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0154 285 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 271 IPR039637 GO:0004535|GO:0030014
Amo19g0154 285 SUPERFAMILY Ribonuclease H-like 12 269 IPR012337 -
Amo19g0154 285 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED 1 271 - -
Amo19g0154 285 Pfam CAF1 family ribonuclease 15 140 IPR006941 -
Amo19g0154 285 Pfam CAF1 family ribonuclease 164 223 IPR006941 -
Amo19g0154 285 Gene3D - 2 273 IPR036397 GO:0003676
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo19g0154 Amo-Chr19 1600701 1603032 Dispersed/Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0154 K12581 - mnt:21396677 471.085