Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0152 ATGGCATCCACTAATGAGACTGAAAATCTGGGTGAGAGTGATACTGTGAAGAAGCTTAAACATGTCGGGAGGAAGCTTCTCAGATGCAATGTTCCTGTTGATGAGCTTCTTGAACTGCTTGATAATCTGGACCTGATACTATCAACAGTCAATCAATTACCAAGTGAGCCAATTCAGGAAGCACTTGTACCTTCCATGAAAGCATTGATTTCTGATGAACTTCTAAGGCACACAGATGAGGATGTTAAGATTTCGGTTACATCTTGCATTGCTGAGATTACAAGAATTACAGCCCCGGATACCCCTTACGACGATGAACAGATGAAGGAAATATTCAACTTAATGGTGGCAGCTTTCGATAAATTATCTGATATATCTGGCCATTATTATGAAAAGGTGCTCTCGATACTCGATAATGTCGCAAAGATCAGACTATGCTTGGTCATGCTGGACCTTGAGTGTGATAACTTGATTATTGAGATGTTTCAACATTTCTTGAGAATTGTAAGGTCGAACCATCTGCAAGATGTAATTGATTCCATGGAATTAATAATGACTCTGGTATTGGATGAAAGTGATGAAGTTTCGGCAGACCTTCTTAGACCTCTATTAGATAGTTTAAGAAAAGAAAATCAGACAATTTCTCCTACTTCTTGGTCACTGGCAGAGAAAGTAGTTACCAACAGTTCGGTTAAGCTTAAGCCTTATCTTTTGAGAGCAGTGGAGTCCTCAGGCAGAGCTCTCAATGAGTATGCGCAAATTGTAACTTCTATTTGCCAGAATGAATCTGAATCCTCCCGACACGATCACTCAAACGAACACAATAAGGAAGTGGTTCAAGCTGTCGAGAATGAGCCTGATGTACCCAAAGATGCAGACGAACAAGCAACAACGGCAACAACTGAGATTGATGCAGAGGAACAACCAACAACGGTAACAAGTCAGATTGATGCAGAGGAACAACCAACAACGGTAACAAGTCAGATTGATGCAGAAGAACAACCAACAACAGTAACAGCTCAGATTGATGCAGAAGAACAACCAGCAACCACAACAACTAAGATTGATGCAGCCAAAGATGCGGTTGAACAGCTCTCTGACGTGAACAAGGGGCTCAAACCAGATATTACTTGTGAGAGAGGTGCCGAGATTATAGAAGAAACAAATTTAAATATAATAAGTGCCCATGGTTCTACCATGGATGATCAAATTATCAAAGAGTCCGGTTCAAAACGGAAACCACATCCTGATCATACTAAAAACTCCAAAAGTAGTGACACACAGGCCAATTCAGAAGCAGGAAATTTAGATGCTGTTAAGGAATCAAGATCAGAAACTCATCCAAATACCAGGTCGATTAAGAGGGGTCGTAAGCCTAATTCTTTAATGAATGCTGAGGAAGGCTATGACCATTCCTGGATTCGTTCAGGAAAGAAAACTCGAAAACTGACTTCATCTAAAAAGAATGGTAATAGCAGCTCTGTTTCTCTGCTTCCTGAGGATCCTACATCCCAAAATGATGAAATGCAGTCAAAGCCTGAAACTGCAAGCGAAGCTCAAGCTTCTCAGCTGGAAAAAGAGAACACTCCACAACCTGTTCAATCCAAAAAGACTCGCAATGTTAGCCGAGATTCTTCACCGAATGAGAATCCTGCTTCCGGCAAGGAAAATGTGCCATCGAAGCACAAAGATACCTGTGAAGGACATAAAGTTTTAGCTTCCGAAACAAAAACTGATAATAATATTGATGTTAGTGCTCCTTCACCAAATCCTAACTTACCTGATGGAAGCCGCCGGAAAAGGGGCCGACCAAGGAAAAAAGTTAGCACAGGGAATCAAGATGTTGATCCAAATTGTTTGTCAAAGTCAATGAAAGACAATTCAAGTCCTCAGCCAGAGCGAAATTTTTCAGAATCTCCTAATGATAAGTTGAAAAAGGAATCTGAAGTAAGGAAAGATTCTGAAGTAAAACCTCATACTTCAATTAGGAAAATCAAATTCACTATGAAGAGTGATAAGAAAAATGCTGCGGCTCCCAAATCAGTAGTTGTTGGGATGGAACCTAAGGTTCCTTGTGAAGATGATCAGAAACAAAAGTCTGCTGTAAATGTTGAGGTGGAAAATAGAGAAGAGGACAAACCCCCATCCCAAAAAGAAGCTAAGAAAAGGAAGAAGCTTAAATCTACTGCTAATAAGGATCTCGACAAATCGTCTGCTGATGAGGAGCTAATTACAGGATTTGCAAGTAAAACATTAAATGGAGTTGAAAAAACCCCTCAAACAAGGCTGACAAGAAGGCATGCCAAAGGAAAGGAATCGAAAACAGTTGACCTTGTCGAACCATTGCCTGGTAGTAAGATCATGGTCTGGTGGCCAGCGGACAAAACGTTTTATGAGGGGGTTGTTGAATCTTATGATCCTGTCAAAAAAAGGCACACGGTTTTGTATACCGATGGAGAAACCGAAAGATTAAACCTTAAAAAGGAGAAATGGATGGCTGCTTCTGCAGAGGTACAAGGACTTGCTCTTCAGAGACTCGCCGAGGCATCGGATACAACACAAATGAACAACAATGAGATATCAAAGTTGGAGTTGGCAAAGGGTGTAAAAGTCAACTCTAAAAAAGCCAGGGGAAGACCTTGTGCCGGCACCTCGAAATCGAAATCTGTAAAATCAGTGATTCTGTCTGCACTCGACAAATCGAGTCCGGCTGATGATGCCCCGGACCATCCGCCGGCCGGGAACACAAAAGCCAAGCGATCAAAGATGGGTTCCGAGCTCAGAAAGAAGCGCAAGATGCTTGAATTTTGA 2811 0.4144 MASTNETENLGESDTVKKLKHVGRKLLRCNVPVDELLELLDNLDLILSTVNQLPSEPIQEALVPSMKALISDELLRHTDEDVKISVTSCIAEITRITAPDTPYDDEQMKEIFNLMVAAFDKLSDISGHYYEKVLSILDNVAKIRLCLVMLDLECDNLIIEMFQHFLRIVRSNHLQDVIDSMELIMTLVLDESDEVSADLLRPLLDSLRKENQTISPTSWSLAEKVVTNSSVKLKPYLLRAVESSGRALNEYAQIVTSICQNESESSRHDHSNEHNKEVVQAVENEPDVPKDADEQATTATTEIDAEEQPTTVTSQIDAEEQPTTVTSQIDAEEQPTTVTAQIDAEEQPATTTTKIDAAKDAVEQLSDVNKGLKPDITCERGAEIIEETNLNIISAHGSTMDDQIIKESGSKRKPHPDHTKNSKSSDTQANSEAGNLDAVKESRSETHPNTRSIKRGRKPNSLMNAEEGYDHSWIRSGKKTRKLTSSKKNGNSSSVSLLPEDPTSQNDEMQSKPETASEAQASQLEKENTPQPVQSKKTRNVSRDSSPNENPASGKENVPSKHKDTCEGHKVLASETKTDNNIDVSAPSPNPNLPDGSRRKRGRPRKKVSTGNQDVDPNCLSKSMKDNSSPQPERNFSESPNDKLKKESEVRKDSEVKPHTSIRKIKFTMKSDKKNAAAPKSVVVGMEPKVPCEDDQKQKSAVNVEVENREEDKPPSQKEAKKRKKLKSTANKDLDKSSADEELITGFASKTLNGVEKTPQTRLTRRHAKGKESKTVDLVEPLPGSKIMVWWPADKTFYEGVVESYDPVKKRHTVLYTDGETERLNLKKEKWMAASAEVQGLALQRLAEASDTTQMNNNEISKLELAKGVKVNSKKARGRPCAGTSKSKSVKSVILSALDKSSPADDAPDHPPAGNTKAKRSKMGSELRKKRKMLEF* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0152 936 MobiDBLite consensus disorder prediction 577 592 - -
Amo19g0152 936 MobiDBLite consensus disorder prediction 760 776 - -
Amo19g0152 936 SUPERFAMILY Tudor/PWWP/MBT 783 823 - -
Amo19g0152 936 MobiDBLite consensus disorder prediction 611 637 - -
Amo19g0152 936 MobiDBLite consensus disorder prediction 753 777 - -
Amo19g0152 936 MobiDBLite consensus disorder prediction 408 740 - -
Amo19g0152 936 MobiDBLite consensus disorder prediction 423 437 - -
Amo19g0152 936 MobiDBLite consensus disorder prediction 638 673 - -
Amo19g0152 936 MobiDBLite consensus disorder prediction 294 354 - -
Amo19g0152 936 MobiDBLite consensus disorder prediction 438 452 - -
Amo19g0152 936 MobiDBLite consensus disorder prediction 895 936 - -
Amo19g0152 936 PANTHER TRANSCRIPTIONAL REGULATOR 16 926 - -
Amo19g0152 936 MobiDBLite consensus disorder prediction 726 740 - -
Amo19g0152 936 MobiDBLite consensus disorder prediction 690 719 - -
Amo19g0152 936 CDD TUDOR 784 828 IPR002999 -
Amo19g0152 936 Pfam Sister chromatid cohesion protein PDS5 protein 34 237 - -
Amo19g0152 936 MobiDBLite consensus disorder prediction 556 576 - -
Amo19g0152 936 MobiDBLite consensus disorder prediction 486 555 - -
Amo19g0152 936 SUPERFAMILY ARM repeat 51 266 IPR016024 -
Amo19g0152 936 MobiDBLite consensus disorder prediction 408 422 - -
Amo19g0152 936 Gene3D - 780 831 - -
Amo19g0152 936 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 16 926 IPR039776 GO:0007064
Amo19g0152 936 MobiDBLite consensus disorder prediction 283 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0152 Amo-Chr19 1588224 1594729 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0152 - - adu:107463779 1716.44