Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0130 ATGCTTCTTCTCTGCGCTTCTTCCTCTCTTCTCCACCTCACAAACTCTTCACTCCTCTCTTCTCTTCTTCTCTTTTCTTCTTCTTCTTCATCTTCATCTTCTTCTTCTTCTTCAACCTCACATTCTCTCAGAAACCCCTTATTCCCATTCAAGCTCACTACTTCCACCACCACCAGAATCCAAAGCCTTGCTAAGGAAGAAGCTTCATCTTCATCTTCATCAGAATTAGGTTATGATCCAAAGGCAGGTGTTTCCGTTTACAAGCCCAAATCATACGAAGTTCTCGTCACTGATGCAGCCAATTCCCTCGCTTTTGCTCTCCAAGACGCCAAAATTCGCCTCGAGATCGATTTCCCGCCCTTGCCCAGCAACATAAGTTCTTATAAGGGATCTTCAGATGAGTTCATTGATGCCAACATTCAACTCTCATTGGCTGTTGTGAAAAAGCTCCAGGAGAAACAGGAGACCCGAGCTTGCTTAGTCTTCCCTGATAAGCCAGAAAAGCGCAGAGCCTCCGAGTTGTTCAAATCAGCTCTGGATTCGATTGATGGCATTACCATTGGTTCCTTAGATGATGTCCCTGCTGGACCTATGACTTCATTTTTCCGGTCCGTTAGGAACACCCTTGATTTTGATTTTGAAGATGAAAATGAAGATCGATGGAAGTCTAATGAGCCTCCATCACTCTACATATTCCTTAACTGCAGTACGCGTGAACTTGCAAATATTGAGAAGTATGTGGAAAAATTTGCCGTGTCTACACCAACACTTCTATTTAATCTTGAACTAGACACACTACGTGCCGATTTAGGCCTTTTGGGCTTCCCTCCCAAAGATTTGCATTACCGCTTCCTTTCACAATTTACTCCGGTATTCTACATTAGAATCAGAGAGTATTCAAAGACAGTTGCAATAGCACCTTATATTGTCAATTACAGTGGAGCAGTGTTCCGCCAGTATCCAGGTCCTTGGCAGGTGATGCTTAAGCAAGCAGATGGTTCTTACGCTTGCATAGCAGAAAGCGCAACCCGCTTCACCCTTGGTGAAGCCAAAGAAGAGTTGTTGAGAGTCTTGGGACTTCAAGAAGAGGAGGGAAGCTCTCTAGAATTTCTTCGAAGAGGCTACAAGGTGTTCTATTTTGCAAGCACATGGTGGGAAGAAGATTTTGATTTGGAAGCATCTTCTGCATGGAGGAGCTGA 1200 0.4408 MLLLCASSSLLHLTNSSLLSSLLLFSSSSSSSSSSSSSTSHSLRNPLFPFKLTTSTTTRIQSLAKEEASSSSSSELGYDPKAGVSVYKPKSYEVLVTDAANSLAFALQDAKIRLEIDFPPLPSNISSYKGSSDEFIDANIQLSLAVVKKLQEKQETRACLVFPDKPEKRRASELFKSALDSIDGITIGSLDDVPAGPMTSFFRSVRNTLDFDFEDENEDRWKSNEPPSLYIFLNCSTRELANIEKYVEKFAVSTPTLLFNLELDTLRADLGLLGFPPKDLHYRFLSQFTPVFYIRIREYSKTVAIAPYIVNYSGAVFRQYPGPWQVMLKQADGSYACIAESATRFTLGEAKEELLRVLGLQEEEGSSLEFLRRGYKVFYFASTWWEEDFDLEASSAWRS* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0130 399 Pfam Domain of unknown function (DUF1995) 89 351 IPR018962 -
Amo19g0130 399 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 42 399 - -
Amo19g0130 399 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 42 399 IPR044687 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0130 Amo-Chr19 1244281 1247751 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0130 - - aip:107617195 681.404