Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0115 ATGTCTCAGATCACAACATCATCATCATCATCATCATCATCATCATCATCATTATCATTTTTTGTCAGCAACAACAACAACAACAATCATACTAATAAGAAGAGTTGTTTCACAACAACACTTGTTAGCAGCAGCAGCATCTCCTATTTATGCAACGATTTGCTCTCAGAGATCTTCACAAGGCTCCCTTTTCGATCAACAACGATATGCAAATGCGTCTCAAAGAGCTGGCTCGAATTGATTTCAACTTCTCACTTCATTTGCCAGTTCATGGGGACACAACATAAGTTCTATGGTGCTAGCTTGGTTTTTCTATCACCACATCAACTCATGCTAACTTTCCCTCCAGACCCTTATGATGATACTGATAACGATGATGATTTAGAACATGATCATCAGAACAAAAGGATTGTAATTTCCCCTGAGGTTTTCATCAAAGGGACAGTGTGTGGTTGTTCCATGAATGTTTTCTTGTGTAGTGACAACAGGTACACAAGTGGCTATGGTTATTTCCTCCATGACCCCATTAACAAGGAATCCTTCAAGCTCCCTTCGCTCGAGGTGAAGAAGGAGTGTCTTCATGCTATTGGCTTTACATGTGATCCATTTTATTGCAACGAGGATTCAAGGAGAAACTATCTTGATCCTAAGAAGTGTTTCAGGGTGGTAAGAATCAAGTCCTTCATTGTAAGACACTATGAATTCGAGGTTGATGTTTGGTCCTCAGAGACAGGAAACTGGAGACAAAAGACTGTGATATTAGACGATGGTTTTGCTTTTGCTCCTCATTGGTCAATGAGTTTTGCATATGAAGGAGGATTGTATTTCATGGGTAGGACTAGTATATTTGTTTACGATCCTTATCATCTCAGTGGTGAGACACTTGATTACCCTATTGATTCTGACCCAATGAACATTATGAGCTTTGGTTTTCTTGGATCTTCTTGTGGAGACTTGAGGATTGCTGATATTGGACACAATGATATTAAGGTTTGGGAGTTGGTTTCGAATGATTGGGAATTAGTACACCATGTTGATTTCTCAGGACATTTGCCAAATGAGTTTTGTGCTGATTACTATAAGCGTGTGGGGGGTTTTCACCCACATGAATGGGAGACTGTGTACTTGTATTCTTTTAATGAAGGGATTTATGTTGCAAATCTTCAGACAAAGAAATTTACCTATATCCCTGGATATCAGAAATGTGATTTGAGTCCATTTCATTTGGAGTTGCCATTGTGGTCATCATCACCGGAGGAGTGA 1263 0.3943 MSQITTSSSSSSSSSSSLSFFVSNNNNNNHTNKKSCFTTTLVSSSSISYLCNDLLSEIFTRLPFRSTTICKCVSKSWLELISTSHFICQFMGTQHKFYGASLVFLSPHQLMLTFPPDPYDDTDNDDDLEHDHQNKRIVISPEVFIKGTVCGCSMNVFLCSDNRYTSGYGYFLHDPINKESFKLPSLEVKKECLHAIGFTCDPFYCNEDSRRNYLDPKKCFRVVRIKSFIVRHYEFEVDVWSSETGNWRQKTVILDDGFAFAPHWSMSFAYEGGLYFMGRTSIFVYDPYHLSGETLDYPIDSDPMNIMSFGFLGSSCGDLRIADIGHNDIKVWELVSNDWELVHHVDFSGHLPNEFCADYYKRVGGFHPHEWETVYLYSFNEGIYVANLQTKKFTYIPGYQKCDLSPFHLELPLWSSSPEE* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0115 420 Pfam F-box domain 48 88 IPR001810 GO:0005515
Amo19g0115 420 SUPERFAMILY F-box domain 42 116 IPR036047 GO:0005515
Amo19g0115 420 SMART fbox_2 50 90 IPR001810 GO:0005515
Amo19g0115 420 SUPERFAMILY Galactose oxidase, central domain 237 396 IPR011043 -
Amo19g0115 420 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 46 409 - -
Amo19g0115 420 PANTHER OS08G0529300 PROTEIN 46 409 - -
Amo19g0115 420 Gene3D - 42 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0115 Amo-Chr19 1100126 1101388 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0115 - - aip:110271807 759.214