Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0110 ATGGCTGCTGCTTCAGTTGCTGGGGTTGTTGGTGGAAAAGGGTCATCATCTTCTTCATGGATGAAACAATTCAAAGGAAACAAAGGAAAGAAGATGAACAAGTTTAGGATTTCATGCTCTTCTTCTTCTGTAGCAGATCCTTATAAGACCTTAAGGATTCAACCTGATGCATCTGAATCTGAAGTTAGAAAGGCTTTCAGACAACTTGCTTTGAAGTATCATCCAGATGTATGCAGAGGGAACAATTGTGGGGTGCAGTTTCATCAAATCAATGAGGCTTATGATATTGTGATGGCTAATTTGAGAGGAGAATCAAATGAGACAGAAGTGTACAATGTTTATTATGAAGATAAGGGCATTGATGAGCCTCTTAGGGGAATGAACGATCCAGATTGGGACATGTGGGAGGAATGGATGGGTTGGGAAGGTGCAGGAATCCGTGATTACTCTTCTCACATTAATCCTTAYATTTAA 474 0.4008 MAAASVAGVVGGKGSSSSSWMKQFKGNKGKKMNKFRISCSSSSVADPYKTLRIQPDASESEVRKAFRQLALKYHPDVCRGNNCGVQFHQINEAYDIVMANLRGESNETEVYNVYYEDKGIDEPLRGMNDPDWDMWEEWMGWEGAGIRDYSSHINPYI* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0110 157 Gene3D DnaJ domain 15 105 IPR036869 -
Amo19g0110 157 PANTHER CO-CHAPERONE PROTEIN DJLA 3 157 - -
Amo19g0110 157 SUPERFAMILY Chaperone J-domain 43 145 IPR036869 -
Amo19g0110 157 SMART dnaj_3 45 102 IPR001623 -
Amo19g0110 157 CDD DnaJ 46 96 IPR001623 -
Amo19g0110 157 ProSiteProfiles dnaJ domain profile. 46 115 IPR001623 -
Amo19g0110 157 PANTHER HEAT SHOCK PROTEIN BINDING PROTEIN 3 157 - -
Amo19g0110 157 MobiDBLite consensus disorder prediction 1 27 - -
Amo19g0110 157 Pfam DnaJ domain 46 98 IPR001623 -
Amo19g0110 157 PRINTS DnaJ domain signature 48 66 IPR001623 -
Amo19g0110 157 PRINTS DnaJ domain signature 66 81 IPR001623 -
Amo19g0110 157 PRINTS DnaJ domain signature 82 102 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0110 Amo-Chr19 1075134 1077041 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0110 - - gmx:100780336 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0110 19 1075134 1077041 Amo19g0110 19 1075134 1077041 ECH