Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0085 ATGGGCTCCAGAATTCCATCTCATCAGCTCAGCAATGGCCTCTATGTATCAGGCCGGCCGGAGCAGCCTAAAGAAAGGACTCCAACTATGACCTCAACGGCTATGCCATATACTGGTGGAGACATAAAAAAGTCAGGAGAATTGGGAAAAATGTTTGACATCCCGGTTGATGGCTCCAAATCTCGGAAATCTGGACCAATAACTGGTGCTCCTAGTCGGACGGGGTCATTTGGAGGAGCCAGTTCACATTCTGGACCAATCCAGCCCAATTCTGCTGCTCGGGCAGCCTATACTTCAGGTCCAATGACTTCTGGGGGCATGCCTGGTTCAACTTCGCTAAAGAAATCCAATTCTGGACCATTGAATAAGCATGGGGAACCTGTTAAAAAATCTTCAGGTCCTCAGTCAGGTGGAGTAACACCTATTGGGCGTCAAAATTCTGGACCTCTGACTCCTGTTCTTCCAACGACAGGTCTTATTACATCTGGGCCTATATCGTCTGGCCCTCTAAACTCTTCCGGGGCCCCTCGAAAAGTCTCTGGTCCTTTGGATGCGACAGGTTCCATGAAGATGCAAGGTTCTGCTGTAGTTAACAATCAAGCTGTGACGGTTCTCAGTCAAGGTGATGAGTATTCCTTCAGGAGGAACTTTCCAAAGGCGATGTTATGGTTATTAATTCTGCTTTTTGTGATGGGTTTCATTGCTGGCGGTTTTATTCTTGGAGCCGTAAGCAATGCAACCCTCCTTATTGTGGTTGTGGTTCTCTTTTGCTTAGTTATTGCATCTTTCACTTGGAACACTTTTTGGGGAAGAAGAGCTATTATGGGTTTCATCGCTCACTATCCGGACTCCGAGCTCAGAACTGCTAAAAATGGACAATTTGTGAAGGTTTCCGGGGTTGTTACTTGCGGCAATGTGCCTCTTGAGTCATCCTTCCAGAAAGTCCCTAGATGTGTATATACCTCGACAAGTTTGTATGAGTATCGAGGATGGGATTCAAAAGCTGCCAATCCTACACACCGCCGGTTTACCTGGGGCCTTAGATTGCTTGAAAGGCGTGTGGTTGACTTTTACATCTCGGATTTCCAATCTGGTTTAAGAGCACTGGTTAAGACGGGGCACGGAGCAAGGGTGACCCCTTACGTTGATGACTCGGTTCTCATCAATGTAAATCCAACCAAAGAAGAACTGTCTCCGGAGTTGCTCCGTTGGTTGGGAGAGCGAAATCTTTCAAGCGATGACCGGATCATGCGCCTGGAAGAAGGATACATCAAAGAAGGAAGCACGGTAAGCGTGATGGGGGTTGTGCAGAGGAATGAGAATGTGCTTATGATTGTTCCTCCGCCGGAGCCGATAACTACCGGTTGCCAATGGGCCAGGTGCATCTTCCCGGCTAGCCTCGAGGGCATCGTTCTAAGATGTGAAGACACGTCGAAAACCGATGTCATACCAGTTTAA 1458 0.4787 MGSRIPSHQLSNGLYVSGRPEQPKERTPTMTSTAMPYTGGDIKKSGELGKMFDIPVDGSKSRKSGPITGAPSRTGSFGGASSHSGPIQPNSAARAAYTSGPMTSGGMPGSTSLKKSNSGPLNKHGEPVKKSSGPQSGGVTPIGRQNSGPLTPVLPTTGLITSGPISSGPLNSSGAPRKVSGPLDATGSMKMQGSAVVNNQAVTVLSQGDEYSFRRNFPKAMLWLLILLFVMGFIAGGFILGAVSNATLLIVVVVLFCLVIASFTWNTFWGRRAIMGFIAHYPDSELRTAKNGQFVKVSGVVTCGNVPLESSFQKVPRCVYTSTSLYEYRGWDSKAANPTHRRFTWGLRLLERRVVDFYISDFQSGLRALVKTGHGARVTPYVDDSVLINVNPTKEELSPELLRWLGERNLSSDDRIMRLEEGYIKEGSTVSVMGVVQRNENVLMIVPPPEPITTGCQWARCIFPASLEGIVLRCEDTSKTDVIPV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0085 485 MobiDBLite consensus disorder prediction 1 158 - -
Amo19g0085 485 MobiDBLite consensus disorder prediction 165 184 - -
Amo19g0085 485 MobiDBLite consensus disorder prediction 133 158 - -
Amo19g0085 485 PANTHER UBIQUITIN-SPECIFIC PROTEASE FAMILY C19-RELATED PROTEIN 1 485 - -
Amo19g0085 485 MobiDBLite consensus disorder prediction 1 16 - -
Amo19g0085 485 PANTHER OSJNBA0035M09.9 PROTEIN 1 485 IPR040339 -
Amo19g0085 485 MobiDBLite consensus disorder prediction 24 38 - -
Amo19g0085 485 MobiDBLite consensus disorder prediction 65 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0085 Amo-Chr19 858663 863836 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0085 - - gmx:100500141 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0085 19 858663 863836 Amo19g0085 19 858663 863836 PCT