Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3451 ATGGAAAAAGAGATGCTTCGAGTGGCTTCACGCGCCAACCAAAACTCTTCATCTACTAATTCTAAAAAATTAGCTTTCATGTTCCTCACAACATCAACCCTTCCATTTGCACCTTTATGGGAATCATTCTTTAACAACGCCCCAAAAACACACTTCACCATTTACGTCCACGTGGATCCCAGTCATCCCACCATGTTCAAGTGGAAGCCACCCTACTCGAGTGTTTTTCATGATCGCCTGATCTTTTCCAAACATACTGCTAGACACTCTCCCGCACTCGCCGCAGCAGCGCGTAGGTTACTTGCGAGTGCCCTTGTGGATGATCGTGACAACTACATGTTCATACTTCTCTCAGGTTCATGCATTCCTCTACACTCTTTTCACTTCACATACCACGCGCTTGCAAACTCAAACAAAAGCTTCATCGAGATAGCTCCACAAGGTTTAGCCTCGTTTTACCGATGGTCGACGCATAGGCCACATGTGATGCTTCCGGAGGTAAGGTACGAGGACTTTCGAGCTGGGTCCCAATTTTGGTCATTGACACGTAAGCATGCAATGCTGGTCGTGGCGGATACGAAGATTTGGTCAAAATTCAAACTCCCATGCTTGCATTTGTTGATGTGTTTCCCAGAAGAGAATTACTTTCCTACCCTTATGAATATGTTGGACAGAGAAGGGTGCGTGCATGCCACGCTCACCCACGTGGATTGGACTAGGAGTATGGATGGACACCCTCGATATGGTGACCAAGATGATGGCACGCGTCGGGATCCATTTTTGTTTGCAAGGAAATTTTCTCCAGACGCGTTACAAACTTTGATGGCTATAGCAGATCGCGTTATCTTTAAAGATTAG 858 0.4615 MEKEMLRVASRANQNSSSTNSKKLAFMFLTTSTLPFAPLWESFFNNAPKTHFTIYVHVDPSHPTMFKWKPPYSSVFHDRLIFSKHTARHSPALAAAARRLLASALVDDRDNYMFILLSGSCIPLHSFHFTYHALANSNKSFIEIAPQGLASFYRWSTHRPHVMLPEVRYEDFRAGSQFWSLTRKHAMLVVADTKIWSKFKLPCLHLLMCFPEENYFPTLMNMLDREGCVHATLTHVDWTRSMDGHPRYGDQDDGTRRDPFLFARKFSPDALQTLMAIADRVIFKD* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3451 285 Pfam Core-2/I-Branching enzyme 24 248 IPR003406 GO:0016020|GO:0016757
Amo18g3451 285 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 256 285 IPR044174 GO:0016757
Amo18g3451 285 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 2 248 IPR044174 GO:0016757
Amo18g3451 285 PANTHER CORE-2/I-BRANCHING ENZYME 256 285 - -
Amo18g3451 285 PANTHER CORE-2/I-BRANCHING ENZYME 2 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3451 Amo-Chr18 137242930 137243850 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3451 - - aip:107612477 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g3451 18 137242930 137243850 Amo18g3451 18 137242930 137243850 ECH