Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3427 AGGGTGATCCTTAACTTCTTATTATTGCCTTACTTGAAAATCATGATGATGAAGTTTTTTCACCTTGCACTTTTGTCTACACTATTGTTCATAAAATTAATCCTAATTCTTGGAGATGTTGGCACTGCTACTTCTTATGGACCTCCATATATACCCACTAGTTGTGATGGAAATAGAAGAGAGCAATTTCCAGCGGGGAATATGTTTGTAGCTGTGAATGAAGGATTGTGGGACAATGGTGCTGCATGTGGAAGGCGTTACAAAATAAGGTGTCTGAGTGGAGACAATAGACCCTGCAAAAGTGACATAATTGAAGTTAAGGTTGTTGATTTGTGTCATCGAACTCCGTGTCCCACCATGCTTTTGTCAACTACTGCCTTCTCAGCCATCTCTCGCTTCTCCAATGCCAAAATCAACATTGAATATGCCCATATATGA 438 0.3973 RVILNFLLLPYLKIMMMKFFHLALLSTLLFIKLILILGDVGTATSYGPPYIPTSCDGNRREQFPAGNMFVAVNEGLWDNGAACGRRYKIRCLSGDNRPCKSDIIEVKVVDLCHRTPCPTMLLSTTAFSAISRFSNAKINIEYAHI* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3427 145 Pfam Lytic transglycolase 71 142 IPR009009 -
Amo18g3427 145 PANTHER RLPA-LIKE PROTEIN, DOUBLE-PSI BETA-BARREL-RELATED 16 143 - -
Amo18g3427 145 Gene3D - 39 145 IPR036908 -
Amo18g3427 145 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 16 143 - -
Amo18g3427 145 SUPERFAMILY Barwin-like endoglucanases 28 143 IPR036908 -
Amo18g3427 145 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 41 145 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3427 Amo-Chr18 136871120 136872746 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3427 - - gmx:100792215 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g2088 08 33675688 33676943 Amo18g3427 18 136871120 136872746 hybridization