Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3416 ATGTTTGCATCCATTGTTGGAATTATTCTCCTAATTATCTCGGCAATTCAAGCAGTTTGTTCTGTCATTCAAATTCTGCAGCAAGCCAACATGGACCACAATCATGTTATGAATGATATTAGGAGGATGCTGCAGGGTGCAGAGCCACCATTGACCACCGAATGTTGCATTTACAAGGTGCCCTTTGATATCCGCAGGCTCAACCATGATGCATACACCCCAAAGGTTGTTTCCATTGGACCCTTCCACCATGGCAGCACCAGGCTGCAAAACATGGAGAGACACAAGCTTATATACTGCAACGAGTTCCTCCAGCGAGCCGGCGGCACAACTCTCGATTTGGACAGTTTTGTCAGCCGAATTGAGCAGGCCGAACCCGACATCCGGCGTTTTTACTCCGATATTATTCCCTTGTCACCTGAGGAACTTGTCAAAGTAGTGCTTGTTGATTGTACTTTCATATTTGAACTTTTCTGGAGGCATTTTTATGGGGATTGGTCAAAGGATGATACCCTCTTATGGAAACCTTGGTTGACAACCAACATAAGATTGGATTTGTTGTTGCTTGAAAATCAGATTCCTTTCTCAATTCTTGAGGACCTTTTCAATCATTCTGGTGTTGGTAAGGTCCATTCATTTCTTGATCTTACCTTTGATTATTTCGGGTACTACAATAGCTCTAATTTGACTCCTCATAATGTTAAGATAGAACACTTCACTGATCTGCTTAGAGTATTTTACTTGAAGCCTTTGGAATCATTACCTTTCACCAAGGGTAGGACTAATGAATCTATGATACAGCTTAAGAGTGCTACCGAGCTGGTTGATGCAGGAGTTAAATTTGATGTGAACACTAAGAGCAATTGCGCAATGGACTTGAGATTCTCCGGGAAGAAGGTTCTTGAGATCCCTATGTTGAGAGTGGAGGATTGGACGGAGACATTGTTTCGCAACATGATGGCATTGGAGCAGTGCCACTACCCGGACGAGGCCTACTTCACCGACTATATTGCTGTCTTGGACTTCCTTATAAACACTAGTAGGGATGTGGATGTGCTGGTTGAAAAGGGAATATTGGTGAATTGGTTAGGGGATGCTGATTCTGTTGCCAGTTTGTTCAATGGTCTTTGGAAGAACATTACTCATGTGAATTTCAGTGAGCATTACTATACACTTTGCAGAGACTTGGATCTTTTCTGCATAGATCCTTTGCATAAAATGAAAGCTACCTTGTGGCGCGATTATGGCAGGACTCCATGGCAAGCTGCTGCATCCATTGCTGGATTCTTACTCCTAATCCTCTCTTTGATTCAAACAGTTTGTTCTATCTTACAGGTTGTGCCGAAATAA 1350 0.4274 MFASIVGIILLIISAIQAVCSVIQILQQANMDHNHVMNDIRRMLQGAEPPLTTECCIYKVPFDIRRLNHDAYTPKVVSIGPFHHGSTRLQNMERHKLIYCNEFLQRAGGTTLDLDSFVSRIEQAEPDIRRFYSDIIPLSPEELVKVVLVDCTFIFELFWRHFYGDWSKDDTLLWKPWLTTNIRLDLLLLENQIPFSILEDLFNHSGVGKVHSFLDLTFDYFGYYNSSNLTPHNVKIEHFTDLLRVFYLKPLESLPFTKGRTNESMIQLKSATELVDAGVKFDVNTKSNCAMDLRFSGKKVLEIPMLRVEDWTETLFRNMMALEQCHYPDEAYFTDYIAVLDFLINTSRDVDVLVEKGILVNWLGDADSVASLFNGLWKNITHVNFSEHYYTLCRDLDLFCIDPLHKMKATLWRDYGRTPWQAAASIAGFLLLILSLIQTVCSILQVVPK* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3416 449 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 35 447 IPR004158 -
Amo18g3416 449 Pfam Plant protein of unknown function 57 434 IPR004158 -
Amo18g3416 449 PANTHER UPF0481 PLANT-LIKE PROTEIN 35 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3416 Amo-Chr18 136658513 136661222 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3416 - - gmx:100785283 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g3416 18 136658513 136661222 Amo18g3416 18 136658513 136661222 ECH
Amo08g2077 08 33550942 33553867 Amo18g3416 18 136658513 136661222 hybridization