Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3412 ATGAGATTAAAAAAGGGAAGTAAAGTGGAGGTTCTTGCCAGCACTGAGGGGCCGTGTGTCGAATTTCGATGTGCTCAAATTATCTCTGGTAATGGGCGAACTTACAGCGTCCAGTACGAGTGCTCTACTGTGACAAGTGAGGCAGGTGTGCAGAGAATTCAAAGGAAGGCCATCAGGCCCTGCCCCCCTCTTATTGAAGGTGTTGAGAGCTGGAAAGCTTGTGATATTGTGGAGGTTTACGATGCTGGTTCTTGGAAAGTGGCTACTGTTTTGAAGGTCCTAGGTCGGGATTTCTACCTGGTAAGGTGCTTGTCATCTTGCAAGCAGATGAAGGTTCACAAAGATGGCATGAGGGTGCGGCAATCATGGATAAATGATCAATGGATCATTAATCAACAGGATCTTGGTAATTCGGGAGGTGGGAAGTCTAGCTGCAATTTGATTTCAAACAGTTATAAGGTGATGCATGAAGTTCAACAACCTGGTACCAGAAAAAGTCAGCAAGATAGAAGTGATTGTTTCTCAAGTACAAATGCTAATGCTCTCTACAAGCCTTTTGCAGCTTCATCTACAGGACTGAAGAGACTGTCTCCATATGGTAATTCTGCTGTTGATGCTTATCCCAAAAAGATGAGGGCTGTTATAAATAAGACTGAGTATGAAAGATCCAAAGTGGTTCCGACAGCCCAAAAGGTAGATGTTATTGCTTACCCACAAAATAAAATGGGTGAAAAATGCATGTATGATTCCATTATTAATGGTACCAACCAATATTGTGAAACATGGAAGAAACCTCCCCATGTCACAACATGTTATTTTGAAAGAATTGCGGAGCCAGATTATTCTTGTAATGATCTGAGTTCTGTTGGCAGTTGTAGTGTGATAGGTAGTAGTACAAGTAGAAGTTCCAGTAATATGTTAGCAGGTTCTTGCCATGATGAAGATACCCTTTCTAGTGACGCAGAGTCTTTAAATGTTGGAGATTTGGATAAAGGGTGTCCAATTTCTCCTGAGGAGGATGTAGCAGAAGGAATTCATAGGGTAGAGTTGCATGCCTATCGCAGTACTCTAGAGGCAATATATGCTTCTGGTTCTTTAAGTTGGGAACAAGAAGAGTTATTGACTAATCTTCGTATATCACTACATATTTCTAATGATGAACATTTGATGGAGATAAAGAACTTAGCTTCAGTTGGTCAGAATTTTTAG 1209 0.4111 MRLKKGSKVEVLASTEGPCVEFRCAQIISGNGRTYSVQYECSTVTSEAGVQRIQRKAIRPCPPLIEGVESWKACDIVEVYDAGSWKVATVLKVLGRDFYLVRCLSSCKQMKVHKDGMRVRQSWINDQWIINQQDLGNSGGGKSSCNLISNSYKVMHEVQQPGTRKSQQDRSDCFSSTNANALYKPFAASSTGLKRLSPYGNSAVDAYPKKMRAVINKTEYERSKVVPTAQKVDVIAYPQNKMGEKCMYDSIINGTNQYCETWKKPPHVTTCYFERIAEPDYSCNDLSSVGSCSVIGSSTSRSSSNMLAGSCHDEDTLSSDAESLNVGDLDKGCPISPEEDVAEGIHRVELHAYRSTLEAIYASGSLSWEQEELLTNLRISLHISNDEHLMEIKNLASVGQNF* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3412 402 SUPERFAMILY ENT-like 338 396 IPR036142 -
Amo18g3412 402 SMART ENT_2 341 402 IPR005491 -
Amo18g3412 402 Pfam Agenet domain 6 63 IPR008395 -
Amo18g3412 402 SMART agenet_At_2 69 125 IPR014002 -
Amo18g3412 402 SMART agenet_At_2 1 66 IPR014002 -
Amo18g3412 402 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 1 282 - -
Amo18g3412 402 Gene3D ENT domain 336 397 IPR036142 -
Amo18g3412 402 PANTHER PLANT TUDOR-LIKE RNA-BINDING PROTEIN 1 282 - -
Amo18g3412 402 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 341 402 IPR005491 -
Amo18g3412 402 Pfam ENT domain 345 395 IPR005491 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3412 Amo-Chr18 136368254 136372668 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3412 - - gmx:100812171 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g2068 08 33430810 33434703 Amo18g3412 18 136368254 136372668 hybridization