Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3407 ATGAGAAGACTCTTCTTTTTGTTGGCTCTGTTGTGTGTTCTATGTCACGTAGCATTCTCCTTTAACGACGGACAAGTGGCAAATGGAAATTTCGAGCAAGGTCCGAAAGCGTCGGACATGAAAGGCACGGTGGTGACGAAGCGCGACGCCATACCGGAGTGGGAGATCTCCGGCTTAGTTGAGTACATAAAATCAGGTCAAAAACAAGGTGACATGTTGCTAGTAGTGCCAGAGGGTGCACATGCAGTGAGGCTTGGCAATGGTGCTTCAATCAAACAGAGAATCAAGGTCATAAAAGGAAATTACTATTCCATAACGTTTGTGGTGGCTCGCACGTGTGCACAAAATGAGAGACTCAATGTTTCTGTGGCACCAGATTGGGTTGTGTTACCTATGCAAACGTTGTATAGTAGTGACGGTTGGGATGCTTATGCTTGGTCTTTTCAAGCAGATTACTCTCTTGCTGAGTTGGTTATTCATAATCCAAGATCAAAGGAAGAGGATCAAGCTTGTGGACCACTCATTGATTCCATTGCTATCAAAGCACTCTACCCTCCTAGACCAACTAAAATTAACATATTAAAGAACGGTGGATTTGAAGAAGGACCATACATATTTCCAAACACATCATGGGGTGTTCTAATTCCACCAAACATTGTAGACCTAAGTGACCACTCTCCCATACCAGCGTGGATTGTAGAGTCCTTAAAAGCAGTGAAGTACATAGATTCTCAACACTTCTCTGTCCCACAAGGAAACAGAGCAGTGGAGCTTGTAGCTGGAAAAGAAAGTGCCATTGCACAAGTTGTAAGAACAGTTGTTGGCAGAACCTATGTCCTTACTTTTGATGTTGGAGATGCTGGTGATTCATGTGAAGGCCCAATGGTTGTTGAAGTCTATGCAGCAAAAGAGAACACAAAAGTGTCTTATGAATCAAAGGGTAAAGGTGGCTTCAAACTTGGGTTTCTCAAGTTTAAGGCTATTAGCACAAGAACTAGAATTGTGTTCCTCAGCTCCTTCTATACCATGAAGAGTGATTCATCTTTATGTGGCCCGGTTATTGATGATGTCAGGTTGATTAGCGTTCATAAATCTTAA 1098 0.4271 MRRLFFLLALLCVLCHVAFSFNDGQVANGNFEQGPKASDMKGTVVTKRDAIPEWEISGLVEYIKSGQKQGDMLLVVPEGAHAVRLGNGASIKQRIKVIKGNYYSITFVVARTCAQNERLNVSVAPDWVVLPMQTLYSSDGWDAYAWSFQADYSLAELVIHNPRSKEEDQACGPLIDSIAIKALYPPRPTKINILKNGGFEEGPYIFPNTSWGVLIPPNIVDLSDHSPIPAWIVESLKAVKYIDSQHFSVPQGNRAVELVAGKESAIAQVVRTVVGRTYVLTFDVGDAGDSCEGPMVVEVYAAKENTKVSYESKGKGGFKLGFLKFKAISTRTRIVFLSSFYTMKSDSSLCGPVIDDVRLISVHKS* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3407 365 Pfam Protein of unknown function (DUF642) 25 181 IPR006946 -
Amo18g3407 365 Pfam Protein of unknown function (DUF642) 193 358 IPR006946 -
Amo18g3407 365 PANTHER OS02G0527500 PROTEIN-RELATED 6 364 - -
Amo18g3407 365 Gene3D - 188 361 - -
Amo18g3407 365 PANTHER PLANT/F18G18-200 PROTEIN 6 364 - -
Amo18g3407 365 SUPERFAMILY Galactose-binding domain-like 21 181 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3407 Amo-Chr18 136327843 136332053 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3407 - - gmx:100801917 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g3407 18 136327843 136332053 Amo18g3407 18 136327843 136332053 ECH