Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3376 ATGTGTAGTACTAACACTTCAGTACTTGATTGCTTCAACCCTGATGCAAAATTCAACATGCGTGATCGAAACACTGCAAATTATCATCCAAGTATTTGGAAGGATTATTTCCTTCAATATGCTTCACAATCCATGAAAGAAGTTGTCAAAATGCTTATTGACGCCTCAAAGGCTATTGAAGAAATAGTTGACTTGATTGATTTAATATGTCATTTGGGGATTCATTATCACTTTGAAAGCGAGATTGATGAAGTGCTGCAACAAATTCACAAGAATTATACGGAAAATGGAAGAAATAATAATTGTTTAATTTTTGTACAATATCTAGATGTGTTCAACAAATACAAGGATAATGAGAGTGGAAACTTTAGTGAAAAACTTGTGAAGAATGTGGAAGGATTACTAGAGTTGTATGAAGCATGTCATCTCAGAATTCATGGAGAAGAGATATTAGATGAAGCTTTTGCATTCACTTCCACTCAACTTAAATCCATTGCCACCCAATTGAAGCCTTCTCTTGCAGCACAAGTCAAGTATAGTTTAGGTCAACCTTTCCACCAAGGTTTGCCAAGATTGGAGGCACGCCGTTTTATTTCAATATATGAAGAAGATCCAACCCATAATCCCACTCTCCTCGTTCTTGCAAAATTAGATTTTAATGTCCTACAAACCTTGCTCGAAAAGAATTTGGAGCTTAATGTTGCTGTAAAACTACTATATGCTCGAGATAGAATTGTAGAATGTTGTAACTGGATTTTGGCGGTTTATTTTGAACCTCAATATTCTCAAGCTAGGAAAATTCTGATAAAATTGATTGCTCTTATATCAATTATTGATGATACATATGATGCCTATGGAACTATAGCTGAATTAAAACTTTTCACGGAGGCAATTGAAAGGTGGGATATTAGCTCCTTGGATGATCTTCCAGAATACATGAAATTAATTTATGAGTCTCTCATCAAAATTTTTGAAGAAGTAGAACGAGAACTTGAAAAACAAGGAAGAGGATATTGCATTAAATATTCCATTAAAGAACTTCAAAAGACAATCCAGGCCTATATGACTGAAGCCAAATGGTTGAATAACAAGTATATACCAACAATGGCAGAGTACATCCAAACATCAACAATATCATCTGGTTATCCGTTGTTAATAACAGTTTCTTACATTGGCATGGGAGATACCGCGGTAGAAGACATCTTCAAATGGGTAACAAGTAAACCCAAAATTGTTACAGCTTCCACAATTATTTGCAGGTTCATGGATGACATTTTTGAACAAGAAAGAGAACATGTTGCCTCAATAATAGAATGCTATATGAGAGATTGTGGTGTATCTAAAGAAGAAGCCATTCAAGAATTGCAAAAGGGAGTTACAGATGCTTGGAAGGATATAAATGAGGAATGCCTCAAGCCAACCAAAGTTCCAATGTTATTTCGCGTGTTCTGA 1452 0.3506 MCSTNTSVLDCFNPDAKFNMRDRNTANYHPSIWKDYFLQYASQSMKEVVKMLIDASKAIEEIVDLIDLICHLGIHYHFESEIDEVLQQIHKNYTENGRNNNCLIFVQYLDVFNKYKDNESGNFSEKLVKNVEGLLELYEACHLRIHGEEILDEAFAFTSTQLKSIATQLKPSLAAQVKYSLGQPFHQGLPRLEARRFISIYEEDPTHNPTLLVLAKLDFNVLQTLLEKNLELNVAVKLLYARDRIVECCNWILAVYFEPQYSQARKILIKLIALISIIDDTYDAYGTIAELKLFTEAIERWDISSLDDLPEYMKLIYESLIKIFEEVERELEKQGRGYCIKYSIKELQKTIQAYMTEAKWLNNKYIPTMAEYIQTSTISSGYPLLITVSYIGMGDTAVEDIFKWVTSKPKIVTASTIICRFMDDIFEQEREHVASIIECYMRDCGVSKEEAIQELQKGVTDAWKDINEECLKPTKVPMLFRVF* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3376 483 SFLD Isoprenoid Synthase Type I 207 480 - -
Amo18g3376 483 PANTHER TERPENE SYNTHASE 2-RELATED 19 481 - -
Amo18g3376 483 CDD Terpene_cyclase_plant_C1 23 478 IPR044814 GO:0010333|GO:0016102
Amo18g3376 483 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 29 206 IPR008930 -
Amo18g3376 483 Gene3D Farnesyl Diphosphate Synthase 30 480 IPR008949 -
Amo18g3376 483 PANTHER OS04G0344100 PROTEIN-RELATED 19 481 - -
Amo18g3376 483 Pfam Terpene synthase family, metal binding domain 212 465 IPR005630 GO:0000287|GO:0010333|GO:0016829
Amo18g3376 483 Pfam Terpene synthase, N-terminal domain 30 181 IPR001906 GO:0010333|GO:0016829
Amo18g3376 483 SFLD Terpene Cyclase Like 1 C Terminal Domain 207 480 IPR034741 -
Amo18g3376 483 Gene3D - 57 207 IPR036965 GO:0010333|GO:0016829
Amo18g3376 483 Coils Coil 344 364 - -
Amo18g3376 483 SUPERFAMILY Terpenoid synthases 207 481 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3376 Amo-Chr18 135738642 135744103 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3376 K15803 - aip:107611637 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g3376 18 135738642 135744103 Amo18g3376 18 135738642 135744103 ECH