Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3374 CACGTTTCACCAAATGTGTTCAACAAATACAAGGATGAGAATGGAAATTTCAGTGAAAAACTTGTGAAGGATGTGGAGGGATTGGTAGAGTTGTATGAAGCATGTCATCTCAGAATTCATGGAGAAGAAATATTAGATGAAGCTTATGCATTCGCTTCCACTAAACTTAAATCCATTGCGACCCAATTGAAGCCTTCACTTGCAGCACAAGTCAATTATAGTTTAAAGCAATCTTTACACCGAGGTTTGCCGAGATTGGAGGCACGCCGTTTTATTTCAATATATGAAGAAGATCCAACCCATAATCACACTCTACTCACTCTTGCAAAATTAGATTTTAATTTCCTACAAAACTTGCATCGGAAAGAATTTGGCAACATTTGCAAGTGGTGGAAGAAGCTTGATGTTGCTGCAAATTTTCCATATGCTCGAGATAGAATTGTGGAATGTTGTAACTGGGTTCTAGCGGTTTATTTTGAGCCCCAATATTTTCAAGCTAGAAAAATATTGACAAAACTGGTGGCTGTTACGTCAATTATTGATGATACATACGATGCTTATGGAACTATAGATGAATTGAAACTTTTCACTGAGGCAATTGAAAGGTGGGATATTGGCTGTTTGAATGAACTTCCAGAATACATGAAATTAATTTATGACTCTCTCTTCAATATTTTTGAAGAAGCAGAAAGAGAACTTGAAAAGCAAGGAAGAACACATTGCATTAAATATGTCATAAAAGAATTTCAAAAGACAATCCAGGCCTACATGACTGAGGTCAAATGGTTGAATAACAAGTATATACCAACAATGGCAGAGTACATCCAAACATCAGCAATATCATCTGGTTATCCGTTGCTCATAGCAATTTCCTATGTTGGCATGGGAGATATAGCCACAAAAGACATCTTTAAATGGGTAACAAATAAACCCAAAATTGTTACAGCTTCTGCAAATATGTGCAGGATCATGGATGACATTGTCTCTAATGAGTTTGAACAGAAAAGAGAACATATTGCCTCAATAATAGAATGCTACATGAGAGATTGTGGTGTATCTAAAGAAGAAGCCATTCAAGAATTGCAAAAGAGAGTTACAGATGCTTGGAAGGATATAAATGAGGAATTCCTGAAGCCAACAGAAGTTCCAAGGCTGTTTCTAATGAATATTCTCAACATGTCACGATTTATGGATGTGATGTACAAAGATGAAGATTGCTACACTCATGCTGAAGGAAAAATGAAGAAATGCATTCAAGCTTTGTTTGTTGATCCAGTGCCAATAATATGA 1290 0.3612 HVSPNVFNKYKDENGNFSEKLVKDVEGLVELYEACHLRIHGEEILDEAYAFASTKLKSIATQLKPSLAAQVNYSLKQSLHRGLPRLEARRFISIYEEDPTHNHTLLTLAKLDFNFLQNLHRKEFGNICKWWKKLDVAANFPYARDRIVECCNWVLAVYFEPQYFQARKILTKLVAVTSIIDDTYDAYGTIDELKLFTEAIERWDIGCLNELPEYMKLIYDSLFNIFEEAERELEKQGRTHCIKYVIKEFQKTIQAYMTEVKWLNNKYIPTMAEYIQTSAISSGYPLLIAISYVGMGDIATKDIFKWVTNKPKIVTASANMCRIMDDIVSNEFEQKREHIASIIECYMRDCGVSKEEAIQELQKRVTDAWKDINEEFLKPTEVPRLFLMNILNMSRFMDVMYKDEDCYTHAEGKMKKCIQALFVDPVPII* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3374 429 Coils Coil 246 266 - -
Amo18g3374 429 Pfam Terpene synthase family, metal binding domain 106 371 IPR005630 GO:0000287|GO:0010333|GO:0016829
Amo18g3374 429 Pfam Terpene synthase, N-terminal domain 1 75 IPR001906 GO:0010333|GO:0016829
Amo18g3374 429 SFLD Isoprenoid Synthase Type I 101 426 - -
Amo18g3374 429 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 1 100 IPR008930 -
Amo18g3374 429 Gene3D - 1 115 IPR036965 GO:0010333|GO:0016829
Amo18g3374 429 CDD Terpene_cyclase_plant_C1 1 425 IPR044814 GO:0010333|GO:0016102
Amo18g3374 429 SUPERFAMILY Terpenoid synthases 101 426 IPR008949 -
Amo18g3374 429 Gene3D Farnesyl Diphosphate Synthase 116 429 IPR008949 -
Amo18g3374 429 SFLD Terpene Cyclase Like 1 C Terminal Domain 101 426 IPR034741 -
Amo18g3374 429 PANTHER OS04G0344100 PROTEIN-RELATED 5 410 - -
Amo18g3374 429 PANTHER TERPENE SYNTHASE 2-RELATED 5 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3374 Amo-Chr18 135695372 135714782 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3374 K15803 - adu:107463233 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g3374 18 135695372 135714782 Amo18g3374 18 135695372 135714782 ECH