Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3363 ATGTGTAGTACTAACACTTCAGTACTTGATTGCTTCAAACCTGATGCAAAATTCAACATGCGTCATCGAAACACTGCAAATTATCATCCTAGTATTTGGAAGGATTATTTCCTTCAATATGCTTCACAATCCATGGAATTTGATGATGAAACGAAGGCACAAATTGAAAATCTGAAGAAAGAAGTTGTCAAAATGCTTATTGATGCCTCAAAGCCCATTGAAGAAATAGTTGACTTGATTGATTTAATATGTCGTTTGGGCATTCATTATCACTTTGAAAGCGAGATTGATGAAMTGCTGCAACAAATTCACAAGAATTATACKAAAAATGGAGAAATAATAASTWTTGATGATAACCTTCGCTTACTTGCTTTYCTTTTTAGGTTATTAAGGCAACAAGGATATCACGTTTCACCYYATGTGTTCAACAAATACAAGGATGAGAATGGAAAGTTTAGTGAAAAACTTGTGAAGGATGTGGAGGGATTGCTAGAATTGTATGAAGCATGTCATCTCAGAATTCATGGAGAAGAGATATTAGATGAAGCTTATGCATTCACTTCCACTCAACTTYAATCCATTGCWACCCAATTGAAGCCTTCACTTGCAGCACAAGTCAATTATAGTTTAAYGCAATCTTTACACCGAGGTTTGCCGAGATTGGAGGCACGCCGTTTTATTTCAATATATGAAGAAGATCCAACCCATAATCACACTCTCCTCACTCTTGCAAAATTAGATTTTAATTTCCTACAAAACTTGCATCGGAAAGAAGTTGGCAACATTTGCAAGTGGTGGAAGAAGCTTGATGTTCCTGCAAATTTTCCATATGCTCGAGATAGAATTGTGGAATGTTGTAACTGGGTTCTAGCGGTTTATTTTGAGCCTCAATATTTTCAAGCTAGAAAAATATTGACAAAATTGTTAGCTTTTACGTGGGATATTGGCTGTTTGAATGATCTTCCAAAATACATGAAATTAATTTATGAGTCTCTCTTCAATATTTTTGAAGAAGCAGAAAGAGAACTTGAAAAGCAAGGAAGAACACATTGCATTAAATATGTCATAAAAGAATTTCAAAAGACAATCCAGGCCTACATGACTGAGGTCAAATGGTTGAATAACAAGTATATACCAACAATGACAGAATACATCAAAACATCATCAATAACATCCGGTTATCCAATGCTAATAACAGCTTCTTACATTGGCATGAAAGATATGGCCACAGAAGACATCTTCAAATGGGTAACAAGTAAACCCAAAATTGTTACAGCTTCCACAATTATTTTCAGGTTCATGGATGACATTGTCTCTAATGAGTTTGAACAGAAAAGAGAACATATTGTCTCATACTTAGAATGCTATATGAGAGAATGTGATATATCTAAAGAAGAAGCCATTCAAGAATTGCAAAAGGGAGTTACAAATGCTTGGAAGGATATAAATGAGGAATGCCTGAAGCCAACTAAAGTTCCAATGTTGTTTCTAATGCGTATTGTCAACATGGCAAGATTTATTGATGTGATGCACAAAGATGAAGATTGTTACACTCATGCTGAAGGAAAAATGAAGAAATGCATTCAAGCTTTGCTTGAATTTGATGATGAAACGAAGGCACAAATTGAAAAACTGAAGAAAGAAGTAGTCAAAATGCTTATTGATATCTCTAAACCCATTGAAGAAATAGTTAACTTGATTGATTTAATATGTCATTTGGGCATTCATTATCACTTTGAAAGCGAGATTGATGAAGTGCTGCAACAAATTCACAAGAATTATACAAAAAAAGGAGAAATAATAATTGTTGATGATAACCTTCGCTTACTTGCTTTGCTTTTTAGGTTATTAAGGCAACAAGGATATCACGTTTCACCAAATGTGTTCAACAAATACAAGGATGAGAATGGAAATTTCAGTGAAAAACTTGTGAAGGATGTGGAGGGATTGGTAGAGTTGTATGAAGCATGTCATCTCAGAATTCATGGAGAAGAAATATTAGATGAAGCTTATGCATTCGCTTCCACTAAACTTAAATCCATTGCGACCCAATTGAAGCCTTCACTTGCAGCACAAGTCAATTATAGTTTAAAGCAATCTTTACACCGAGGTTTGCCGAGATTGGAGGCACGCCGTTTTATTTCAATATATGAAGAAGATCCAACCCATAATCAAATTCTACTCACTCTTGCAAAATTAGACTTTAATTTCCTACAAAACTTGCATCGAAAAGAAGTTGGCAACATTTGCAAGTGGTGGAAGAAGCTTGACGTTGCTGCAAATTTTCCATATGCTCGAGATAGAATTGTGGAATGTTGTAATTGGGTTCTAGCGGTTTATTTTGAGCCCCAATATTCTCAAGCTAGAAAAATATTGACAAAATTATTGGCTCTTACATCAATTATTGATGATACATACGATGCTTATGGAACTATAGATGAACTAAAACTTTTCACTGAGGCAATTGAAAGGTGGGATATTGGCTGTTTGAATAATCTTCCAAAATACATGAAATTAATTTATGTGTCTCTCCTCAAGATTTTTGAAGAAGCCGAACGAGAACTTGAGAAGCAAGGAAGAGTACATTGCATTAAATATGCCATAAAAGAATTTCAGAAGACAATTCAGGCCTACATGACGGAGATCAAATGGTTGAATAACAAGTATATACCAATAATGACAGAATACATCAAAACATCAACAATAACATCTGGTTATCCGATGCTAATAACAGTTTCTTACATTGGCATGAAAGATATGGCCACAGAAGTCATCTTCAAATGGGTAACAAGTAAACCCAAAATTGTTACAGCTTCCACAATTATTTGCAGGTCCATGGATGACATTGTCTCTAATGAGAAAAGAGAACATATTGTCTCATATTTAGAATGCTATATGAGAGAATGTGATATATCTAAAGAAGAAGCCATTCAAGAATTGCAAAAAGGAGTTACAGATGCTTGGAAGGATATAAATGAGGAATGCCTCAAGCCAACAGAAGTTCCAAGGCCGTTTCTAATGAATATTCTCAACCTGGCACGGTTTATGGATGTGATGTACAAAGATGAAGATTGTTACACTCATGCTGAAGGAAAAATGAAGAAATGCATCGAAGCTTTGCTTGTGGATCCGATTGAAGAACCCTTGCATCTAACCGAGATCATGGGACTCGTACACGGGTACCATGGTCGATTAGAGAAACTTGAACAGGAGATCGCGCGACAAAGAGAGGCAGAAAGAGATTTGTGA 3249 0.3527 MCSTNTSVLDCFKPDAKFNMRHRNTANYHPSIWKDYFLQYASQSMEFDDETKAQIENLKKEVVKMLIDASKPIEEIVDLIDLICRLGIHYHFESEIDEXLQQIHKNYTKNGEIIXXDDNLRLLAFLFRLLRQQGYHVSPXVFNKYKDENGKFSEKLVKDVEGLLELYEACHLRIHGEEILDEAYAFTSTQLXSIATQLKPSLAAQVNYSLXQSLHRGLPRLEARRFISIYEEDPTHNHTLLTLAKLDFNFLQNLHRKEVGNICKWWKKLDVPANFPYARDRIVECCNWVLAVYFEPQYFQARKILTKLLAFTWDIGCLNDLPKYMKLIYESLFNIFEEAERELEKQGRTHCIKYVIKEFQKTIQAYMTEVKWLNNKYIPTMTEYIKTSSITSGYPMLITASYIGMKDMATEDIFKWVTSKPKIVTASTIIFRFMDDIVSNEFEQKREHIVSYLECYMRECDISKEEAIQELQKGVTNAWKDINEECLKPTKVPMLFLMRIVNMARFIDVMHKDEDCYTHAEGKMKKCIQALLEFDDETKAQIEKLKKEVVKMLIDISKPIEEIVNLIDLICHLGIHYHFESEIDEVLQQIHKNYTKKGEIIIVDDNLRLLALLFRLLRQQGYHVSPNVFNKYKDENGNFSEKLVKDVEGLVELYEACHLRIHGEEILDEAYAFASTKLKSIATQLKPSLAAQVNYSLKQSLHRGLPRLEARRFISIYEEDPTHNQILLTLAKLDFNFLQNLHRKEVGNICKWWKKLDVAANFPYARDRIVECCNWVLAVYFEPQYSQARKILTKLLALTSIIDDTYDAYGTIDELKLFTEAIERWDIGCLNNLPKYMKLIYVSLLKIFEEAERELEKQGRVHCIKYAIKEFQKTIQAYMTEIKWLNNKYIPIMTEYIKTSTITSGYPMLITVSYIGMKDMATEVIFKWVTSKPKIVTASTIICRSMDDIVSNEKREHIVSYLECYMRECDISKEEAIQELQKGVTDAWKDINEECLKPTEVPRPFLMNILNLARFMDVMYKDEDCYTHAEGKMKKCIEALLVDPIEEPLHLTEIMGLVHGYHGRLEKLEQEIARQREAERDL* 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3363 1082 Pfam Terpene synthase family, metal binding domain 312 481 IPR005630 GO:0000287|GO:0010333|GO:0016829
Amo18g3363 1082 Pfam Terpene synthase family, metal binding domain 241 311 IPR005630 GO:0000287|GO:0010333|GO:0016829
Amo18g3363 1082 Pfam Terpene synthase family, metal binding domain 728 990 IPR005630 GO:0000287|GO:0010333|GO:0016829
Amo18g3363 1082 PANTHER TERPENE SYNTHASE 2-RELATED 313 518 - -
Amo18g3363 1082 Gene3D Farnesyl Diphosphate Synthase 251 532 IPR008949 -
Amo18g3363 1082 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 534 722 IPR008930 -
Amo18g3363 1082 Gene3D - 558 723 IPR036965 GO:0010333|GO:0016829
Amo18g3363 1082 CDD Terpene_cyclase_plant_C1 23 532 IPR044814 GO:0010333|GO:0016102
Amo18g3363 1082 PANTHER OS04G0344100 PROTEIN-RELATED 20 312 - -
Amo18g3363 1082 Gene3D - 50 250 IPR036965 GO:0010333|GO:0016829
Amo18g3363 1082 SUPERFAMILY Terpenoid synthases 236 532 IPR008949 -
Amo18g3363 1082 CDD Terpene_cyclase_plant_C1 535 1044 IPR044814 GO:0010333|GO:0016102
Amo18g3363 1082 Pfam Terpene synthase, N-terminal domain 32 210 IPR001906 GO:0010333|GO:0016829
Amo18g3363 1082 Pfam Terpene synthase, N-terminal domain 535 697 IPR001906 GO:0010333|GO:0016829
Amo18g3363 1082 Gene3D Farnesyl Diphosphate Synthase 535 1035 IPR008949 -
Amo18g3363 1082 PANTHER OS04G0344100 PROTEIN-RELATED 535 1029 - -
Amo18g3363 1082 PANTHER OS04G0344100 PROTEIN-RELATED 313 518 - -
Amo18g3363 1082 SFLD Terpene Cyclase Like 1 N-term 563 723 - -
Amo18g3363 1082 SFLD Terpene Cyclase Like 1 N-term 77 236 - -
Amo18g3363 1082 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 29 235 IPR008930 -
Amo18g3363 1082 Coils Coil 868 888 - -
Amo18g3363 1082 SFLD Isoprenoid Synthase Type I 723 1046 - -
Amo18g3363 1082 PANTHER TERPENE SYNTHASE 2-RELATED 535 1029 - -
Amo18g3363 1082 PANTHER TERPENE SYNTHASE 2-RELATED 20 312 - -
Amo18g3363 1082 Coils Coil 1058 1082 - -
Amo18g3363 1082 SUPERFAMILY Terpenoid synthases 723 1045 IPR008949 -
Amo18g3363 1082 Coils Coil 356 376 - -
Amo18g3363 1082 SFLD Terpene Cyclase Like 1 C Terminal Domain 723 1046 IPR034741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3363 Amo-Chr18 135588310 135617690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3363 K15803 - adu:107463233 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g3363 18 135588310 135617690 Amo18g3363 18 135588310 135617690 ECH