Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3303 ATGGCTCCAAGATTGGATTTTCCCAATTGGTGGAGTAAGGACACACATGATAAAGGAACAACAACAACACCAGTGGTGGTGAAAATTGAGAATCCCACTTTCTCTGTTGTGRAGATTAATGGTGCAGATGCTGCATTCCGGCCGGTGGAGAAGAGCCGCGGCAAGAATGCGAAACAAGTCACATGGGTTCTGCTTCTCAAGGCTCACCGTGCCGTCGGCTGCATTGCTTGGCTTGCCAGTGTAATGTGGACATTGCTTGGAGCCATCAAGAAAAGGATAGTTCATGGACAGGGTGTTGCTATGGAGGGCGAGAGTGACAAGTTGGAGAGAGGGAAGTTGTTGTTTAGAGTCATTAGAGTGTTCTTGGTGGTTTCATTGGCTGTTCTTGCATTTGAAATTGTTGCTTATCTTCAAGGATGGCAATTCAGGAACCCAAATTTGCATATTCTTCCGAATGCCTTGGATTTCGAGGGGTTACTCCACATGGCGTATGTTGGTTGGCTGAGGTTTCGTGTTGAATACATCGCGCCGCCTGTACAAGTACTCTCGAAGTTCTGTGTTGTTTTGTTTCTTATCCAATCCCTGGATCGTATGGTTCTTTGCATGGGATGCTTTTGGATTAGATACAAGAAGGTTAAGCCAAGGTTTGCTGGGGATCCCTTCAAGGTTGATGATATTGAAGGATCTGCAAGCCATTACCCCATGGTTCTGATTCAGATTCCAATGTGTAATGAGAGAGAGGTGTATGAGCAGTCTATTTCAGCAGTCTGCCAAATCGATTGGCCTAGGGATTGTTTACTGATTCAAGTACTCGATGATTCTGATGATGAGAGCATACAGTGCTTAATTAAGACCGAGGTCTCCAAATGGAGTCGAAAGGGAGTCAACATAATCTATAGGCATCGGTTAAACAGGACTGGATATAAAGCTGGGAATCTCAAATCTGCAATGAGCTGTGACTATGTGAAAGGCTACGAGTTTGTTGCAATTTTCGATGCAGACTTTCAACCAAATCCTGATTTTCTTAAACAAACTGTGCCACATTTCAAGGACAATCCTGAACTAGGTTTGGTCCAAGCTAGATGGTCTTTTGTGAACAAGGATGAGAACTTGTTGACTCGTCTCCAAAACATTAACTTATGCTTCCACTTCGAGGTAGAACAACAGGTCAATGGACTATTTCTCAATTTTTTTGGTTTTAATGGAACTGCTGGTGTTTGGAGGATCAAAGCCCTTGAAGAATCTGGAGGCTGGCTTGAGAGGACAACGGTAGAAGATATGGACATTGCGGTCCGAGCTCATCTCAATGGATGGAAGTTTATCTTCCTAAATGATGTTAAGGTGCTTTGTGAAGTTCCTGAGTCATATGAAGCTTATAGGAAGCAGCAACACCGTTGGCATTCAGGTCCTATGCAACTTTTTAGATTGTGCCTCCCTGCAATTGTTAGATCTAAGGTGTCAACATGGAAGAAAGCAAACTTAATACTCCTCTTTTTTCTTTTAAGGAAACTAATTCTTCCCCTTTATTCCTTCACCCTGTTCTGTATAATTCTTCCTTTAACCATGTTCGTGCCTGAGGCTGAGCTTCCGTTGTGGGTGATTTGCTATGTGCCGGTTTTCATGTCATTCCTTAACATCCTCCCTGCCCCAAAATCTTTTCCTTTTATTGTTCCTTACCTTCTTTTTGAAAACACCATGTCCGTCACCAAATTCAATGCAATGGTATCTGGACTCTTCCAATTAGAGAGCTCTTATGAATGGATTGTGACAAAGAAGGCCGGAAGGTCATCTGATTCTGATTTGTTGGCAGCCGAACAAAGGGAAGCCAAGTCGATAGAGCATCAAAAGATCCATAAAGGAGCTTCTGAGAGCGAACTTGTTGAGTTACACCACTTTAAGGAACAAAAAGAATATGCTCCAACACCTATCAAGAAAGCTAATAAAATTTACAAGAAAGAGTTGACTTTGGCATTCCTCCTCCTCACTGCTTCTGTCCGGAGTCTATTATCAGCACAAGGAGTTCACTTCTACTTTCTGCTTTTCCAAGGGGTGACCTTCCTCCTAGTCGGTCTCGACTTGATTGGAGAGCAAATGAGCTAG 2100 0.431 MAPRLDFPNWWSKDTHDKGTTTTPVVVKIENPTFSVVXINGADAAFRPVEKSRGKNAKQVTWVLLLKAHRAVGCIAWLASVMWTLLGAIKKRIVHGQGVAMEGESDKLERGKLLFRVIRVFLVVSLAVLAFEIVAYLQGWQFRNPNLHILPNALDFEGLLHMAYVGWLRFRVEYIAPPVQVLSKFCVVLFLIQSLDRMVLCMGCFWIRYKKVKPRFAGDPFKVDDIEGSASHYPMVLIQIPMCNEREVYEQSISAVCQIDWPRDCLLIQVLDDSDDESIQCLIKTEVSKWSRKGVNIIYRHRLNRTGYKAGNLKSAMSCDYVKGYEFVAIFDADFQPNPDFLKQTVPHFKDNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGLFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIVRSKVSTWKKANLILLFFLLRKLILPLYSFTLFCIILPLTMFVPEAELPLWVICYVPVFMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLESSYEWIVTKKAGRSSDSDLLAAEQREAKSIEHQKIHKGASESELVELHHFKEQKEYAPTPIKKANKIYKKELTLAFLLLTASVRSLLSAQGVHFYFLLFQGVTFLLVGLDLIGEQMS* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3303 699 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 227 453 IPR029044 -
Amo18g3303 699 PANTHER - 21 699 - -
Amo18g3303 699 Pfam Glycosyl transferase family group 2 328 533 IPR001173 -
Amo18g3303 699 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 21 699 - -
Amo18g3303 699 SUPERFAMILY Nucleotide-diphospho-sugar transferases 233 515 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3303 Amo-Chr18 134313453 134317198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3303 1 699 Miscellaneous Gene Families AT4G31590 76.714 0.0 1100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3303 - - gmx:100776577 1214.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1981 08 32061589 32065036 Amo18g3303 18 134313453 134317198 hybridization