Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2019 ATGCTTGGAACTATAGCTACTTCCATTACCGTAACACCATGTTTTTCACCCTCCATCAATTTCCTTCCAAGATCTAATCATGTTCTCACAACAACCTCAAACTCAATTCTTCCATTGAATCATGGCCACTGTGTCACTCTCTTTTCAGCTTCCCCCTTGCATTTTACTTTCTACAGGAGCTTTAGAAGACCCAACACTCTGTTCTTTGCAGAAACTGCTTCATCTGCTGCTACGAATGCTGAATACGTGGAGGAACCAGCAACAAATGTGAAATTTCAGACATCTTTGATGGTTCCGGGTTGCTCGGATTCATTAATTTTGCTTGGAACTGGATTCAGAGAGAAAGTTTTTGCAATCATTGGAGTCAAGGTCTATGCCGCAGGCCTATATCTGAATCAATCTATCATAAGTGAGTTGAATGTTTGGAAAGGGCAATCAAAAGATATAATTCAAGGAGATTCTTCTTTGTTCAAGACCATTTTCCAAACATCCCTTGAGAAATCATTGCAAATCATTCTGGTCAGAGATGTTGATGGTAAAACTTTTTGGGACGCCTTAAGTGACGCAATATCACCAAGAATTGTAGAACCTACAACTGCAGATGAATCTGCTTTGTCTGCGTTCCGCGATTTCTTCCTTAATCTTTCTCTTAGGAAAGGAACTTCCATATTTTTGACTTGGCCAAACCCCTCCAAATTGCTTGTTTCTGTCTCCTCACAGGGTCTTCCATCTGCAGTGGATGCTACAATGGAATCAACAAATGTAGCTTCTGCTTTGTTTGATGTATTTCTTGGTGATAATTCTGTCTCTCCCTCCTTGAAAGCTTCAGTGGCCGAAGGCTTATCGAAAGTACTAAAGTAG 861 0.4053 MLGTIATSITVTPCFSPSINFLPRSNHVLTTTSNSILPLNHGHCVTLFSASPLHFTFYRSFRRPNTLFFAETASSAATNAEYVEEPATNVKFQTSLMVPGCSDSLILLGTGFREKVFAIIGVKVYAAGLYLNQSIISELNVWKGQSKDIIQGDSSLFKTIFQTSLEKSLQIILVRDVDGKTFWDALSDAISPRIVEPTTADESALSAFRDFFLNLSLRKGTSIFLTWPNPSKLLVSVSSQGLPSAVDATMESTNVASALFDVFLGDNSVSPSLKASVAEGLSKVLK* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2019 286 PANTHER FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC 43 285 - -
Amo18g2019 286 Gene3D - 135 281 IPR016089 -
Amo18g2019 286 SUPERFAMILY Chalcone isomerase 82 286 IPR036298 GO:0016872
Amo18g2019 286 Pfam Chalcone-flavanone isomerase 89 283 IPR016087 GO:0016872
Amo18g2019 286 Gene3D - 92 263 IPR016088 -
Amo18g2019 286 PANTHER FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC 43 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2019 Amo-Chr18 49266573 49269591 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2019 - - aip:107613981 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2019 18 49266573 49269591 Amo18g2019 18 49266573 49269591 ECH