Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1971 ATGCTGCAGTCTGATGGGCAGAACTCCATAATTGTTGTTGGTGGTGCGAATATGAGCTGCTGGCCTGAGATTCTTCCTCAGCATGATCTTGATGTTGTTAGGAACGCTGGCATTGTCTTGCTCCAGAGGGAAATCCCTGATGCTGTCAACATTCAGGTCGCAAAGGCTGCAAGGAGTGCTGGTGTCCCAGTAATTTTTGACGCTGGGGGCATGGATTCTCCAATTCCACAAGAATTACTGAACTATGTTGATATTCTGAGCCCTAATGAAACTGAACTTGGTCGCCTTACAGGAATGGCAACTGAAAGCTTTGAAGATATTGCACAGGCTGCAGCTAAATGCCATAAATGGGGAGTTAAGCAAGTCCTTGTGAAACTCGGGGAGAAAGGATCAGCACTTTTTATTGAAGGAGAAGAACCAATTCAGCAACCTGCCATATTTGCTAAGAAGGTTCTTGATACCACTGGGGCTGGTGATACTTTTACAGCTGCTTTTGCTGTTGCATTAGTTGAGGGCAAATCCAAAAAGGAATGCCTCAAATTTGCCGCTGCCGCGGCTTCTCTTTGTGTTCAAGTGAAGGGGGCCATTCCCAGCATGCCTGATAGGAAATCTGTTCTGGAACTTCTTAACTATCATTGA 639 0.457 MLQSDGQNSIIVVGGANMSCWPEILPQHDLDVVRNAGIVLLQREIPDAVNIQVAKAARSAGVPVIFDAGGMDSPIPQELLNYVDILSPNETELGRLTGMATESFEDIAQAAAKCHKWGVKQVLVKLGEKGSALFIEGEEPIQQPAIFAKKVLDTTGAGDTFTAAFAVALVEGKSKKECLKFAAAAASLCVQVKGAIPSMPDRKSVLELLNYH* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1971 212 PRINTS Ribokinase signature 78 93 IPR002139 GO:0016301
Amo18g1971 212 PRINTS Ribokinase signature 122 133 IPR002139 GO:0016301
Amo18g1971 212 PRINTS Ribokinase signature 8 21 IPR002139 GO:0016301
Amo18g1971 212 CDD ribokinase 1 201 IPR011877 GO:0004747|GO:0006014
Amo18g1971 212 PANTHER SUGAR KINASE 1 211 - -
Amo18g1971 212 SUPERFAMILY Ribokinase-like 2 209 IPR029056 -
Amo18g1971 212 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 153 166 IPR002173 GO:0016773
Amo18g1971 212 Gene3D - 1 211 IPR029056 -
Amo18g1971 212 Pfam pfkB family carbohydrate kinase 2 201 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1971 Amo-Chr18 46571118 46574008 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1971 K00852 - qsu:112000343 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1971 18 46571118 46574008 Amo18g1971 18 46571118 46574008 ECH