Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1862 ATGAAACTCGTAACTCTCTTCTTCTTCTTCTTCTTCTTCTCTCTCTCGCTTCTTATTGCATCCTCATTTGTTTCTGCAGCCACTCTACAACAACAGGAAGTGCAAGTTCTTAAGGAGATAGGGAACACACTTGGGAAGAAAGATTGGGACTTCAGCGTAGATCCATGCAGTGGAGAACGTAACTGGGTTTCCCCTGCTTCTACACCTTCCTTGAAAAATTATGCTGTCACTTGTGATTGTTCTTTCTCTAATAACAATCTCTGCCATGTTGTTGGCATAGTTCTAAAAAGACAAAATCTAACTGGCACTCTTCCTCCGGAGTTTGCAAAGTTGCCTTACCTGCAAGAAATTGATCTCACTCTCAACTATCTTAACGGCACAATCCCAAAGCAATGGAGTTCCTTGAATGTTGTCAACATTTCCCTTTTTGGAAATCGAATAACAGGCTCAATTCCAAAGGAGCTGGGAAACATAACTACCCTGAAAAGTTTGTCCTTGGAGTTCAATCAACTCTCTGGAGAGCTTCCTCCTGAGCTTGGGAATCTTTTGCAGCTTGAAAGATTGCATGTTAGCTCCAACTCTTTTACTGGGAATTTACCCACTACACTTGCTAGGCTCAGTAAATTGAATTACGTTCGACTCAGTGATAATCAATTTTCCGGAGCAATACCCAATTTTATTCAGAGCTGGACAAGTCTTCAGAGGCTGGTGATCCATGGGAGTGGTATGAGTGGACCAATTCCTTCTGGAATTTCATTTCTGAAAAACCTTACTGACTTGAGAATCAGCGACTTGAAAGGACCAGATTCTTATTTTCCACCACTTAGTAACTTGACAAACTTGCAAACACTAGTACTGAGAAGTTGCAATCTTATAGGATCGGTTCCTGAATATCTTGGAAATGTAACTACTTTAAACTCGTTAGACCTCAGTTTTAACAAGTTAAGTGGAAGTATCCCAAACTCCCTCCGTGTCCCAGAGAACATGAATATACTGTACTTAACTGGAAACTTTTTCACTGGACCACTGCCGAATTGGATTGCTAACCCGGACTACACGGATCTTTCATATAACAACTTCAGCATCGAAAAGCCAGAGCAGTTGACATGTCAACAAGGAACTGTAAACCTTTTTGCATCAGCTTTGAATGGAAATAACTCGGGAGCTTATCCATGTTTGGGGATCACCAACTGTCTTAAGCCTTCATACTCTCTCCATATAAATTGTGGTGGGAAGATCATAACTTATAATGGAAACATTACATATGATGAAGATTCACAAGAAGCTGGACCAGCAAAATCTCTTCGTAGTGGATCAAACTGGGCAGTTAGCAACACCGGTCACTTCTTTGATAGTGGTATTTCGGACTATTATACATGGTCTAACATGTCTAAGCTTGCTATGAACAATGCCGAACTGTACATGGATGCACGTGTTTCGGCGCTTTCTCTTACATATTATGGGTATTGCATGGGAAATGGAAGCTACACTGTAAATCTCCATTTTGCAGAGATAATGTTTACTGATGATCAAACATATAGTAGCCTTGGAAGGCGTGTATTTGACATATATATTCAGTATTGCAGAGGAAGTTGTTGCTAA 1602 0.4051 MKLVTLFFFFFFFSLSLLIASSFVSAATLQQQEVQVLKEIGNTLGKKDWDFSVDPCSGERNWVSPASTPSLKNYAVTCDCSFSNNNLCHVVGIVLKRQNLTGTLPPEFAKLPYLQEIDLTLNYLNGTIPKQWSSLNVVNISLFGNRITGSIPKELGNITTLKSLSLEFNQLSGELPPELGNLLQLERLHVSSNSFTGNLPTTLARLSKLNYVRLSDNQFSGAIPNFIQSWTSLQRLVIHGSGMSGPIPSGISFLKNLTDLRISDLKGPDSYFPPLSNLTNLQTLVLRSCNLIGSVPEYLGNVTTLNSLDLSFNKLSGSIPNSLRVPENMNILYLTGNFFTGPLPNWIANPDYTDLSYNNFSIEKPEQLTCQQGTVNLFASALNGNNSGAYPCLGITNCLKPSYSLHINCGGKIITYNGNITYDEDSQEAGPAKSLRSGSNWAVSNTGHFFDSGISDYYTWSNMSKLAMNNAELYMDARVSALSLTYYGYCMGNGSYTVNLHFAEIMFTDDQTYSSLGRRVFDIYIQYCRGSCC* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1862 533 Gene3D Ribonuclease Inhibitor 267 380 IPR032675 -
Amo18g1862 533 Gene3D Ribonuclease Inhibitor 33 199 IPR032675 -
Amo18g1862 533 Gene3D Ribonuclease Inhibitor 200 266 IPR032675 -
Amo18g1862 533 Pfam Malectin domain 404 526 IPR021720 -
Amo18g1862 533 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 291 366 - -
Amo18g1862 533 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 76 291 - -
Amo18g1862 533 SUPERFAMILY L domain-like 85 361 - -
Amo18g1862 533 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 384 525 - -
Amo18g1862 533 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 384 525 - -
Amo18g1862 533 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 291 366 - -
Amo18g1862 533 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 76 291 - -
Amo18g1862 533 Gene3D - 400 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1862 Amo-Chr18 41897301 41903614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1862 10 526 Receptor kinase-like Gene Family AT1G29750 44.886 9.15e-140 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1862 - - gmx:100786496 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1862 18 41897301 41903614 Amo18g1862 18 41897301 41903614 ECH