Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1757 ATGGCAAAGGGTAAAGCAACTTCAAAGCTCAACATCGCTATTATTCACCCTGATCTCGGCATAGGTGGAGCTGAAAGATTGATTGTGGATGCAGCTGTTGAGCTTGCATCCCATGGCCATAAAGTTCATATTTTTACTGCACACCATGATAAAAATCGATGCTTTGAGGAAACTATTTCTGGTACCTTTCCAGTTACTGTGTATGGTTCCTTTCTTCCCCGGCATGTATTCTACCGTCTTCATGCATTGTGTGCTTTCCTCCGGTGCCTATTTGTTGCTTTCTGTATGCTTTTTATGTGGCCTTCGTTTGATGTTATAATTGCTGATCAGGTCTCCGTAGTCATTCCCATCTTGAAACTTAAAAGATCAGCAAAGATTGTATTCTATTGTCATTTTCCCGACTTGTTGCTGGCTCAACATACCACTTTCCTCCGGAAGTTGTATCGGACACCAATAGACTATGTAGAAGAAGTAACAACTGGAATGGCTGATTTGATACTTGTTAACAGCAACTTCACTGCTTCTACTTTTGCGAATACTTTTATACATCTCAATGCCAAAGGGATTCGACCAGCTGTTCTGTACCCAGCAGTTAATGTGGATCAGTTCAAAGAACCAAGTTCCTTTAAGCTGAACTTTCTTTCCATTAACCGCTTTGAAAGGAAAAAGAACATAGAATTAGCAATTTTAGCTTTTGCTATGCTTCATTCGCCTGAAGCTTCTTTGACTGTTGCAGGTGGCTTTGACATACGGTTGAAGGAGAATGTGGAATACTTAGAACAGCTTAAGGCTTTAGCTGAAAGAGAAGGTGTCTCTAATAGAATAAGATTCATCACCTCTTGCTCTACCACTGAAAGGAATGCCCTGCTCTCGGAATGCCTGTGTGTCATTTACACTCCAAAGGATGAGCATTTTGGCATTGTTCCGGTGGAGGCGATGGCAGCATACAAACCTGTTATTGCATGCAATAGTGGTGGACCATTGGAGAGTGTGAAGAATGGTGTAACAGGATTCCTTTGTGATCCTACACCAGAAGAGTTTTCTTCTGCAATGGCTAAATTCATAAAAGATCCCAAAGAGGCTGAAAGAATGGGTAGAGAAGCTAGAAAGCATGTGGTTGATTCATTCTCCACACACACATTCGGCCAAAGTTTAAATAGGTATATAGTTGACATTCACAGAGGAAAAGAGGACTGA 1197 0.4127 MAKGKATSKLNIAIIHPDLGIGGAERLIVDAAVELASHGHKVHIFTAHHDKNRCFEETISGTFPVTVYGSFLPRHVFYRLHALCAFLRCLFVAFCMLFMWPSFDVIIADQVSVVIPILKLKRSAKIVFYCHFPDLLLAQHTTFLRKLYRTPIDYVEEVTTGMADLILVNSNFTASTFANTFIHLNAKGIRPAVLYPAVNVDQFKEPSSFKLNFLSINRFERKKNIELAILAFAMLHSPEASLTVAGGFDIRLKENVEYLEQLKALAEREGVSNRIRFITSCSTTERNALLSECLCVIYTPKDEHFGIVPVEAMAAYKPVIACNSGGPLESVKNGVTGFLCDPTPEEFSSAMAKFIKDPKEAERMGREARKHVVDSFSTHTFGQSLNRYIVDIHRGKED* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1757 398 Gene3D Glycogen Phosphorylase B; 6 211 - -
Amo18g1757 398 CDD GT4_ALG2-like 10 385 - -
Amo18g1757 398 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 11 388 - -
Amo18g1757 398 Pfam Glycosyl transferases group 1 212 370 IPR001296 GO:0016757
Amo18g1757 398 Gene3D Glycogen Phosphorylase B; 212 376 - -
Amo18g1757 398 Pfam Glycosyltransferase Family 4 21 201 IPR028098 -
Amo18g1757 398 PANTHER ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 6 395 IPR027054 GO:0004378|GO:0006486
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1757 Amo-Chr18 36928501 36934553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1757 1 398 Glycosyltransferase AT1G78800 76.485 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1757 K03843 - gmx:100809168 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1757 18 36928501 36934553 Amo18g1757 18 36928501 36934553 ECH
Amo18g1757 18 36928501 36934553 Amo07g2331 07 69728586 69734538 hybridization