Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1644 ATGCCGTACATGTTCTGGCAACTCCGCCGGTGGGAACTCAAAATCCTATTCTACCCTGCCACAGCCACTCTCCTCCGAACTCCAACCACATGCTTCCTGCATTCCCTTTCGGACCCACCCCACTGGAAACCACCATCACCACCACCGCCGATCGTTTATCTTCAGAATCTCCTCAAGTTCCGGAGGGACAAGCCCGCCATCGAAGTGGAGCGAGCACTCGACCTATGTGGGTTCCAGCTTAGCGACAAACTCGTCTTCGAAGTGCTTAAACGGCATCATTCTGATTGGAGGCCCGCCCTCGTGTTCTTTAATTGGGCTTGTAAAGCGAGTCCCGAGCGAAATGGGTATGTGCCAAGTTCCGTCGTTTTCAATGAGATTGTGGATATTCTCGGGAAGATGAAGCGGTTTGAGGAGCTCTACCAGGTGCTCGATGAAATGTCCCATAGACAGGGTGTCATGAACGAGTTGGTTTTTTCCACATTGATTCGTAGGTATGTGGGTGCACATAAGGTGGAGGAAGCTGTTGGAATATTCTATAGGAGGAAAGAGTTTGGATTGGAGATTGATTCTAAAGCATTTAGGACCCTCTTGATGTGGTTGTGCAGGTACAAGCATGTAGAAGATGCAGAAACTTTGTTTCGCAGCAAGGTGAATGAGCTTCCACCTGATATAAAGTCCTGGAACGTGATCCTCCATGGTTGGTGCATCTTAGGGAACACACATGAGGCAAAGAGGTTGTGGAAAGACATATTGGCATCTAAGTGCAAGCCAGATCTTTTCACTTATGCAACATTTATCAAGGCAATGACCAAGAAGGGGAAGCTTGGCACTGCACTGAGGTTGTTCCATGGCATGTGGGATAAAGGTTGCAAGCCCGATGTTGTGATATGCAACTGTATTGTTGATGCTCTTTGTTTCAAAAAGAGGGTTCCTGAGGCATTGGAAGTTTTCAAGTGCATGAGCGAAAGGGGTGTTGAACCTAATGTGGCTACTTACAACTCCTTGATCAAACACATGTGTAAGATTCGGCGAATGCAGAAGGTATATGAGCTAGTGAGTGATATGGAAAGGAGGGAGGGGAATTGTTTGCCTAATGCTGTTACTTATAGCTACTTGCTGGGTTCCTTGAAGGAGCCGAAGGAAGTTCCTGTGATTTTGGAGAGGATGGAGAGAAATGGGTGTAGCATGAATGATGATGTTTACAACTTGGTTTTGAGGTTGTACATGGAATGGGATGACCAGGATGGGGTGAGAAGAACATGGGAAGAGATGGAAAGGAATGGATGGGGACTAGATAGGCGATCTTATACAATCCTGATTCATGGGCACCTCAAAAGTGGGAGGACGAAGGATGCCTTGCGCTATTTTAGGGAGATGGTGTCTAAGGGAATGGAGCCTGAGCCAAGAACTGAGAAACTATTGAGTTCCATGAACATTCAGTCAAAAGAAAGAACAGAAAAACAAAAAGGATGA 1473 0.4657 MPYMFWQLRRWELKILFYPATATLLRTPTTCFLHSLSDPPHWKPPSPPPPIVYLQNLLKFRRDKPAIEVERALDLCGFQLSDKLVFEVLKRHHSDWRPALVFFNWACKASPERNGYVPSSVVFNEIVDILGKMKRFEELYQVLDEMSHRQGVMNELVFSTLIRRYVGAHKVEEAVGIFYRRKEFGLEIDSKAFRTLLMWLCRYKHVEDAETLFRSKVNELPPDIKSWNVILHGWCILGNTHEAKRLWKDILASKCKPDLFTYATFIKAMTKKGKLGTALRLFHGMWDKGCKPDVVICNCIVDALCFKKRVPEALEVFKCMSERGVEPNVATYNSLIKHMCKIRRMQKVYELVSDMERREGNCLPNAVTYSYLLGSLKEPKEVPVILERMERNGCSMNDDVYNLVLRLYMEWDDQDGVRRTWEEMERNGWGLDRRSYTILIHGHLKSGRTKDALRYFREMVSKGMEPEPRTEKLLSSMNIQSKERTEKQKG* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1644 490 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 26 489 - -
Amo18g1644 490 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 432 466 IPR002885 -
Amo18g1644 490 TIGRFAM PPR: pentatricopeptide repeat domain 226 258 IPR002885 -
Amo18g1644 490 TIGRFAM PPR: pentatricopeptide repeat domain 260 294 IPR002885 -
Amo18g1644 490 TIGRFAM PPR: pentatricopeptide repeat domain 435 466 IPR002885 -
Amo18g1644 490 TIGRFAM PPR: pentatricopeptide repeat domain 331 365 IPR002885 -
Amo18g1644 490 TIGRFAM PPR: pentatricopeptide repeat domain 121 151 IPR002885 -
Amo18g1644 490 TIGRFAM PPR: pentatricopeptide repeat domain 295 329 IPR002885 -
Amo18g1644 490 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 26 489 - -
Amo18g1644 490 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 223 257 IPR002885 -
Amo18g1644 490 Gene3D Tetratricopeptide repeat domain 216 358 IPR011990 GO:0005515
Amo18g1644 490 Gene3D Tetratricopeptide repeat domain 359 489 IPR011990 GO:0005515
Amo18g1644 490 Pfam PPR repeat family 292 341 IPR002885 -
Amo18g1644 490 Pfam PPR repeat family 222 270 IPR002885 -
Amo18g1644 490 Gene3D Tetratricopeptide repeat domain 61 215 IPR011990 GO:0005515
Amo18g1644 490 Pfam PPR repeat 435 463 IPR002885 -
Amo18g1644 490 SUPERFAMILY TPR-like 92 462 IPR011990 GO:0005515
Amo18g1644 490 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 293 327 IPR002885 -
Amo18g1644 490 MobiDBLite consensus disorder prediction 464 490 - -
Amo18g1644 490 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 258 292 IPR002885 -
Amo18g1644 490 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 328 358 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1644 Amo-Chr18 33000597 33005909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1644 105 489 Glycosyltransferase AT1G05670 24.936 2.26e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1644 - - ahf:112769232 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1644 18 33000597 33005909 Amo18g1644 18 33000597 33005909 ECH