Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1613 ATGCCAACCATTTTGTGTCATCAAAGTTGTCGTCTTTGGAGTTATCTGCTTCAACTCTGTTCTTTCGTTGCCACCAAGAAGTTGAGAACTGAGAAGAACTCACTCTCCTTCTTCGACCTTGAGATTTTGAATGGCGCACTCTCTTTGTTTTGCTCCTATTTGTTCCTTAAAGTCCTCGAACCGACCAGGAGTAGTTACTGGAAATTCGGTCGAAAAGCTTTTCCGATAACAGAAGCATGCCAGAATGCTAAAGCTCGAAAATTTCAGTCTTTGGAGGTTAAGGCTGCGGAAGACAACAGTCAAACCACCACAAAAACAAAGACCATTGTTTGTCCTGACTGTGACGGAAATGGTGCAATCTTATGCACTCAATGCAAAGGCACTGGAGTTAACTCGGTAGACCACTTCAATGGACAATTTAAAGCTGGTGGATTATGTTGGCTATGCAGGGGTAAAAAGGACATTTTGTGTGGAAATTGTAATGGGGCTGGCTTCATTGGTGGATTCATGAGCACATTTGATGATTAG 528 0.4261 MPTILCHQSCRLWSYLLQLCSFVATKKLRTEKNSLSFFDLEILNGALSLFCSYLFLKVLEPTRSSYWKFGRKAFPITEACQNAKARKFQSLEVKAAEDNSQTTTKTKTIVCPDCDGNGAILCTQCKGTGVNSVDHFNGQFKAGGLCWLCRGKKDILCGNCNGAGFIGGFMSTFDD* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1613 175 PANTHER PROTEIN P13.9, PUTATIVE-RELATED 70 168 - -
Amo18g1613 175 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 104 166 IPR036410 -
Amo18g1613 175 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 70 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1613 Amo-Chr18 31585366 31587765 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1613 - - aip:107630431 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1613 18 31585366 31587765 Amo18g1613 18 31585366 31587765 ECH