Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1515 CAACACCTTTGTCTCACAGCACACACCATTTCCAACCACCACAAGCACCGCCTTACACCGCCACCACCACCGGAACCCCCTCGGAATCTGTTCATTTGCATGGCAGTGAGCTTTCTGCAGGAACGCGAGGTATCCGACCTCTGCCTTGGGAAACCACCGTTGAGGTCCCTCTCTGCTTCCTCCACCATCGCACACGCCTTGGCTGCTCTSAACAACTCGGAAGACAACTTCATCAGTGTCTGGACCTGRGATCATCGCAGCAAGAAGGAAGAAGAAGGAGAAGAAGAAGGAGGWGAGTGCTGTAGATGCGTTGGCAAAGTGTGCATGGTTGATGTTGTTTGCTTCCTTTCCAGGGAAGACAACCTCTTGTCTCCCTCTCAAGCTCTCAAAGCTCCTCTTTCTGTTATTCTCACTCAAGCTCCGCCTCGGATCGTCGTGCATCTAGAACCTTCTTCCACTTTACTGGAAGCAATTGATCTGATTCTCCAAGGAGCACAGAATCTTGTGGTGCCGATTATAGCAGCAACAAGAAAGAGTGGAATCTCAAGAAGAAAACAGATTCAGATTCAGAAATCATTGTCAACAAGCCACAATGGGCGTGAATTCTGCTGGATAACGCAAGAAGATGTGATTAGATTCCTACTTGGCTCCATTGGCCTCTTCACCCCTCTCCCTGCACTCTCTATTGACTCCCTCGGCATCATTTCCACCGATGTTCTTGCCATTGACTACTACTCCCCTGCATCCTTGGCGTTACCGGCGATTTCCAAGTCTCTGGCGGATCAAACTTCTGTTGCCATTGTTGATAGTGATGGCACCTTCATTGGCGAGATTTCGCCCTCTACTCTTGGTTGTTGTGACGAGACGGTTGCGGCCGCCATCGCCACTCTCTCTGCCGGGGACCTGATGGCCTACATTGATGGCGGTGGGCCCCCGGAGGATCTTCTCAGAGTGGTGAAGGCGAGGTTGAGAGAGAAGAATTTGGAGAAAATGCTTCAAGAGTTCATGATTTTGTCGCCTTTAGCTAGCGACGCTTCGTCGGCCTCGTCTGCATCATCGTCTGACGAGGAGTCCTCGTCGGCCAGAATACGGATGAGGCCCGGCGGAAGGTACTCTAGATCTTCGAGCTACTCGGCGAGGATGGTGAGGAAGGCTGAGGCCATAGTGTGCCATCCAAAGAGCTCACTTATTGCTGTGATGATTCAAGCAATTGCTCATAGAGTGAACTATTTGTGGGTTATTGAAGATGATTGCAGCTTAGTTGGCATTGTAACATTCTCAAATATGTTGAAAGTTTTCAGAGAACATTTAGAGACTATGTAA 1323 0.4974 QHLCLTAHTISNHHKHRLTPPPPPEPPRNLFICMAVSFLQEREVSDLCLGKPPLRSLSASSTIAHALAALNNSEDNFISVWTXDHRSKKEEEGEEEGGECCRCVGKVCMVDVVCFLSREDNLLSPSQALKAPLSVILTQAPPRIVVHLEPSSTLLEAIDLILQGAQNLVVPIIAATRKSGISRRKQIQIQKSLSTSHNGREFCWITQEDVIRFLLGSIGLFTPLPALSIDSLGIISTDVLAIDYYSPASLALPAISKSLADQTSVAIVDSDGTFIGEISPSTLGCCDETVAAAIATLSAGDLMAYIDGGGPPEDLLRVVKARLREKNLEKMLQEFMILSPLASDASSASSASSSDEESSSARIRMRPGGRYSRSSSYSARMVRKAEAIVCHPKSSLIAVMIQAIAHRVNYLWVIEDDCSLVGIVTFSNMLKVFREHLETM* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1515 440 Gene3D - 362 435 IPR046342 -
Amo18g1515 440 Pfam CBS domain 386 432 IPR000644 -
Amo18g1515 440 ProSiteProfiles CBS domain profile. 381 439 IPR000644 -
Amo18g1515 440 PANTHER CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN-RELATED 39 440 - -
Amo18g1515 440 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 39 440 - -
Amo18g1515 440 SUPERFAMILY CBS-domain pair 224 438 IPR046342 -
Amo18g1515 440 MobiDBLite consensus disorder prediction 348 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1515 Amo-Chr18 29664693 29666511 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1515 - - adu:107462620 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1515 18 29664693 29666511 Amo18g1515 18 29664693 29666511 ECH
Amo18g1515 18 29664693 29666511 Amo08g1558 08 25644205 25646028 hybridization