Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1421 ATGGCAATCGCCGGCGGCGCCCACACGCCGCGCTCCGAAGCTAACCTCTTCAGGTTCTGCCCCTTCTGGAGCTCCGGCAACGCTTCTTCTTCTTCTTCTTCTCTATCTTCTTCAGCTCACAACAACCATAACCACCGCTCCGAAGGGAACAACACTGCTACTTCTGCTTCTGCGTCTTCTTCTTCTTCTTCTTCTGCCAAAACAGTGTCGGCGGTGGCGAGGTCGCTGTTCCCTCCACGTCGAAGGCTCCGTCTCGATCCTTCAAGCTGCCTCTACTTTCCATATGAACCGGGGAAACAGGTTAGGAGTGCGGTTCGTTTGAAAAACACAAGCAAGTCGTATGTTGCTTTCAAGTTTCAAACTACGGCACCAAAGAGTTGTTACATGAGGCCTCCTGGTGGTATTATTGCTCCTGGTGAAAGCTTGATTGCAACCGTGTTTAAGTTTGTGGAGCAACCTGAGAACAATGAAAAGATGTCAGATCAGAAGAACAAGGTGAAGTTCAAAATCATGAGTCTCAAAGTGAAAGAAGGAGTGGACTACGTACCTGAGCTGCCTTGCATGGAGCATGGATTTTATTTCTTTAAGCCAGGAAAAGATAACTCAACTCAACATGGGTTGCTTCTTAAGTTGGCAATCAGCTTTCTTTGGAGAATTCGAAGGACTCATAATGTGCAGACATTTCATTACTGGTTAATGTAA 702 0.4701 MAIAGGAHTPRSEANLFRFCPFWSSGNASSSSSSLSSSAHNNHNHRSEGNNTATSASASSSSSSSAKTVSAVARSLFPPRRRLRLDPSSCLYFPYEPGKQVRSAVRLKNTSKSYVAFKFQTTAPKSCYMRPPGGIIAPGESLIATVFKFVEQPENNEKMSDQKNKVKFKIMSLKVKEGVDYVPELPCMEHGFYFFKPGKDNSTQHGLLLKLAISFLWRIRRTHNVQTFHYWLM* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1421 233 PANTHER VESICLE-ASSOCIATED PROTEIN 4-1 44 185 - -
Amo18g1421 233 Gene3D Immunoglobulins 79 214 IPR013783 -
Amo18g1421 233 Pfam MSP (Major sperm protein) domain 83 183 IPR000535 -
Amo18g1421 233 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 44 185 IPR016763 GO:0005789
Amo18g1421 233 MobiDBLite consensus disorder prediction 33 64 - -
Amo18g1421 233 ProSiteProfiles Major sperm protein (MSP) domain profile. 82 233 IPR000535 -
Amo18g1421 233 SUPERFAMILY PapD-like 72 185 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1421 Amo-Chr18 26645632 26649308 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1421 - - gmx:100778320 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1421 18 26645632 26649308 Amo18g1421 18 26645632 26649308 ECH